Author: tille Date: 2015-10-30 14:49:55 +0000 (Fri, 30 Oct 2015) New Revision: 20346
Modified:
trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
Log:
Reflect dependency changes
Modified:
trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
===================================================================
---
trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
2015-10-30 14:38:42 UTC (rev 20345)
+++
trunk/packages/R/r-bioc-000-dependency-scheme/3.2/BioC_3.2-dependency-tree.ditaa
2015-10-30 14:49:55 UTC (rev 20346)
@@ -31,40 +31,40 @@
| | makecdfenv | |
+-----------+ | +----------+--------+
| +------------+ |
+-------------------------------->| shortread |<-------|---------------+
genomicalignments |
| ^ | |
+-----------+ | +-------------------+
- | | | |
| ^ ^
- | | | |
| | |
- | | | |
| +---------+-+ |
- | | +-------------------------+
+------------------------------------->| rsamtools | |
- | | | |
| | +-----------+ |
-+------+-----+ +-------+--+ |
+--+-----+---+ +------------+ +----+----+ | |
-| hypergraph | | affy |<-----------+ | |
biostrings | | annotate | | biomart | | |
-+------------+ +----------+ | |
+------------+ +------------+ +---------+ | |
- ^ ^ ^ ^ | |
^ ^ ^ | |
- | | | | | |
| | | | |
- +---+---+ +----------------+ | ++--------+ | |
| +------+--------+ | +----------+----+ |
- | graph | | preprocesscore | | | affyio | | |
| | annotationdbi |----+ | genomicranges | |
- +-------+ +----------------+ | +---------+ | |
| +---------------+ +---------------+ |
- ^ | | |
| ^ ^ ^ ^ |
- | | | |
| | | | | |
- | +--------+------+ | |
+------------------|-------------+ | | |
|
- | | biocinstaller | | | |
| | | | |
- | +---------------+ | | |
| +----------------------|---------------+ + |
- | | | |
| | | +---------+ |
- | | | |
| | | | |
- | | | |
+---+---+-+ +-+-----------++ |
- | | | | |
xvector | | genomeinfodb | |
- | | | |
+---------+ +--------------+ |
- | | | |
^ ^ |
- | | | |
| | |
- | +----------+ +-+--+--+-+
+---+-----+ | |
- | | multtest |<-------+ biobase | |
iranges +-------------------------+ |
- | +----------+ +---------+
+-------+-+ |
- | ^
^ : |
- | |
| : |
- +---------------------------------------------+ |
| : |
- | |
| v |
- | |
+--+--------+ +--------------+ |
- | |
+----------------->| s4vectors | | biocparallel
+-----------------+
+ | | | |
| ^
+ | | | |
| |
+ | | | |
| +-------+------+
+ | | +-------------------------+
+----------------------------------------->| rsamtools |
+ | | | |
| | +--------------+
++------+-----+ +-------+--+ |
+--+-----+---+ +------------+ +----+----+ ^ ^
+| hypergraph | | affy |<-----------+ | |
biostrings | | annotate | | biomart | | |
++------------+ +----------+ | |
+------------+ +------------+ +---------+ | |
+ ^ ^ ^ ^ | |
^ ^ ^ | |
+ | | | | | |
| | | | |
+ +---+---+ +----------------+ | ++--------+ | |
| +------+--------+ | +----------+----+ |
+ | graph | | preprocesscore | | | affyio | | |
| | annotationdbi |----+ | genomicranges | |
+ +-------+ +----------------+ | +---------+ | |
| +---------------+ +---------------+ |
+ ^ | | |
| ^ ^ ^ ^ |
+ | | | |
| | | | | |
+ | +--------+------+ | |
+------------------|-------------+ | | | |
+ | | biocinstaller | | | |
| | | | |
+ | +---------------+ | | |
| +----------------------|---------------+ + |
+ | | | |
| | | +---------+ |
+ | | | |
| | | | |
+ | | | |
+---+---+-+ +-+-----------++ |
+ | | | | |
xvector | | genomeinfodb | |
+ | | | |
+---------+ +--------------+ |
+ | | | |
^ ^ |
+ | | | |
| | |
+ | +----------+ +-+--+--+-+
+---+-----+ | |
+ | | multtest |<-------+ biobase | |
iranges +-------------------------+ |
+ | +----------+ +---------+
+-------+-+ |
+ | ^
^ : |
+ | |
| : |
+ +---------------------------------------------+ |
| : |
+ | |
| v |
+ | |
+--+--------+ +--------------+ |
+ | |
+----------------->| s4vectors | | biocparallel +---------+
| | |
+-----------+ +--------------+
| | |
^
| | |
|
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