This is an automated email from the git hooks/post-receive script. afif-guest pushed a commit to branch master in repository artemis.
commit 833dc6aa21d8cd5df932878c51fc8b4ea1eb1050 Author: Afif Elghraoui <[email protected]> Date: Sun Nov 8 12:47:58 2015 -0800 Add /usr/bin/bamview and a desktop entry for it I hadn't done this before because the upstream distribution did not include a script for bamview. The build system, however, generates BamView.jar and it is functional, so let's make it more easily available to the user. --- debian/artemis.links | 1 + debian/desktop/bamview.desktop | 13 +++++++++++++ debian/man/bamview.1 | 6 ++++++ 3 files changed, 20 insertions(+) diff --git a/debian/artemis.links b/debian/artemis.links index 0b4c88f..4726be1 100644 --- a/debian/artemis.links +++ b/debian/artemis.links @@ -1,3 +1,4 @@ usr/share/java/artemis.jar usr/bin/art usr/share/java/act.jar usr/bin/act usr/share/java/DNAPlotter.jar usr/bin/dnaplotter +usr/share/java/BamView.jar usr/bin/bamview diff --git a/debian/desktop/bamview.desktop b/debian/desktop/bamview.desktop new file mode 100644 index 0000000..9bfdde5 --- /dev/null +++ b/debian/desktop/bamview.desktop @@ -0,0 +1,13 @@ +[Desktop Entry] +Comment=Visualize Genome-Sequencing Read Alignment Data +Exec=bamview +GenericName[en_US]=BamView +GenericName=BamView +Icon=helix +Name[en_US]=BamView +Name=BamView +Categories=Science;Biology;DataVisualization; +StartupNotify=false +Terminal=false +Type=Application +Keywords=genomics diff --git a/debian/man/bamview.1 b/debian/man/bamview.1 new file mode 100644 index 0000000..3ba9e87 --- /dev/null +++ b/debian/man/bamview.1 @@ -0,0 +1,6 @@ +.TH BAMVIEW 1 "October 2015" +.SH NAME +bamview \- visualizing genome sequencing read alignment stored in BAM files +.SH SEE ALSO +.BR art (1), +.BR act (1) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/artemis.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
