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tille pushed a change to branch upstream
in repository python-pyfaidx.
from 448c1c4 Imported Upstream version 0.4.2
new d4a7dcf Imported Upstream version 0.4.5
new db5a16e Imported Upstream version 0.4.5.1
The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 7 +
.travis.yml | 3 +-
README.rst | 72 +-
pyfaidx/__init__.py | 88 +-
pyfaidx/cli.py | 29 +-
setup.py | 3 +-
tests/data/chr22.fasta | 828192 ----------------------------------
tests/data/chr22.vcf.gz | Bin 606571 -> 0 bytes
tests/data/chr22.vcf.gz.tbi | Bin 21378 -> 0 bytes
tests/data/download_gene_fasta.py | 13 +-
tests/test_FastaRecord.py | 8 +-
tests/test_FastaVariant.py | 10 +-
tests/test_feature_bounds_check.py | 25 +
tests/test_sequence_class.py | 6 -
14 files changed, 205 insertions(+), 828251 deletions(-)
create mode 100644 .gitignore
delete mode 100644 tests/data/chr22.fasta
delete mode 100644 tests/data/chr22.vcf.gz
delete mode 100644 tests/data/chr22.vcf.gz.tbi
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