Author: tille Date: 2016-11-07 12:59:28 +0000 (Mon, 07 Nov 2016) New Revision: 23004
Modified: trunk/packages/R/r-bioc-savr/trunk/debian/changelog trunk/packages/R/r-bioc-savr/trunk/debian/control trunk/packages/R/r-bioc-savr/trunk/debian/copyright trunk/packages/R/r-bioc-savr/trunk/debian/rules Log: * New upstream version * Convert to dh-r * Generic BioConductor homepage Modified: trunk/packages/R/r-bioc-savr/trunk/debian/changelog =================================================================== --- trunk/packages/R/r-bioc-savr/trunk/debian/changelog 2016-11-06 08:57:21 UTC (rev 23003) +++ trunk/packages/R/r-bioc-savr/trunk/debian/changelog 2016-11-07 12:59:28 UTC (rev 23004) @@ -1,3 +1,11 @@ +r-bioc-savr (1.12.0-1) unstable; urgency=medium + + * New upstream version + * Convert to dh-r + * Generic BioConductor homepage + + -- Andreas Tille <[email protected]> Mon, 07 Nov 2016 13:50:46 +0100 + r-bioc-savr (1.10.0-1) unstable; urgency=low * Initial release (closes: #834720) Modified: trunk/packages/R/r-bioc-savr/trunk/debian/control =================================================================== --- trunk/packages/R/r-bioc-savr/trunk/debian/control 2016-11-06 08:57:21 UTC (rev 23003) +++ trunk/packages/R/r-bioc-savr/trunk/debian/control 2016-11-07 12:59:28 UTC (rev 23004) @@ -4,7 +4,7 @@ Section: gnu-r Priority: optional Build-Depends: debhelper (>= 9), - cdbs, + dh-r, r-base-dev, r-cran-ggplot2, r-cran-reshape2, @@ -14,17 +14,14 @@ Standards-Version: 3.9.8 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-savr/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-savr/trunk/ -Homepage: http://bioconductor.org/packages/release/bioc/html/savR.html +Homepage: https://bioconductor.org/packages/savR/ Package: r-bioc-savr Architecture: all Depends: ${R:Depends}, - ${misc:Depends}, - r-cran-ggplot2, - r-cran-reshape2, - r-cran-scales, - r-cran-gridextra, - r-cran-xml + ${misc:Depends} +Recommends: ${R:Recommends} +Suggests: ${R:Suggests} Description: GNU R parse and analyze Illumina SAV files This BioConductor module enables to parse Illumina Sequence Analysis Viewer (SAV) files, access data, and generate QC plots. Modified: trunk/packages/R/r-bioc-savr/trunk/debian/copyright =================================================================== --- trunk/packages/R/r-bioc-savr/trunk/debian/copyright 2016-11-06 08:57:21 UTC (rev 23003) +++ trunk/packages/R/r-bioc-savr/trunk/debian/copyright 2016-11-07 12:59:28 UTC (rev 23004) @@ -1,7 +1,7 @@ Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: savR Upstream-Contact: R. Brent Calder <[email protected]> -Source: http://bioconductor.org/packages/release/bioc/html/savR.html +Source: https://bioconductor.org/packages/savR/ Files: * Copyright: 2013-2016 R. Brent Calder <[email protected]> Modified: trunk/packages/R/r-bioc-savr/trunk/debian/rules =================================================================== --- trunk/packages/R/r-bioc-savr/trunk/debian/rules 2016-11-06 08:57:21 UTC (rev 23003) +++ trunk/packages/R/r-bioc-savr/trunk/debian/rules 2016-11-07 12:59:28 UTC (rev 23004) @@ -1,7 +1,8 @@ #!/usr/bin/make -f -debRreposname=bioc -include /usr/share/R/debian/r-cran.mk +%: + dh $@ --buildsystem R -install/$(package):: - chmod -x $(debRlib)/$(cranNameOrig)/extdata/MiSeq/InterOp/*.bin +override_dh_fixperms: + dh_fixperms + find debian -name "*.bin" -exec chmod -x \{\} \; _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
