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satta pushed a change to branch upstream
in repository iva.
from 1c5c596 New upstream version 1.0.7+ds
new 83186eb New upstream version 1.0.8+ds
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
iva/common.py | 2 +-
iva/gage/getMummerStats.sh | 2 ++
iva/kraken.py | 16 ++++++++++++++++
.../NC_123456.embl => kraken_count_cds_from_embl.0} | 7 -------
.../NC_123456.embl => kraken_count_cds_from_embl.1} | 0
.../NC_123456.embl => kraken_count_cds_from_embl.2} | 10 ++++++++++
iva/tests/kraken_test.py | 9 ++++++++-
scripts/iva_qc_make_db | 2 +-
setup.py | 2 +-
9 files changed, 39 insertions(+), 11 deletions(-)
copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl =>
kraken_count_cds_from_embl.0} (72%)
copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl =>
kraken_count_cds_from_embl.1} (100%)
copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl =>
kraken_count_cds_from_embl.2} (73%)
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