This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch experimental in repository barrnap.
commit a4b6f54f9af6aa45b433f7b5ef9415528c3500cf Author: Sascha Steinbiss <sa...@debian.org> Date: Sun Apr 9 08:47:19 2017 +0000 refresh patch --- debian/patches/use_debian_dirs | 14 ++++---------- 1 file changed, 4 insertions(+), 10 deletions(-) diff --git a/debian/patches/use_debian_dirs b/debian/patches/use_debian_dirs index 1e31962..914f98e 100644 --- a/debian/patches/use_debian_dirs +++ b/debian/patches/use_debian_dirs @@ -1,19 +1,13 @@ Description: Do not rely on path location relative to barrnap executable --- a/bin/barrnap +++ b/bin/barrnap -@@ -14,9 +14,14 @@ +@@ -14,6 +14,9 @@ my $AUTHOR = 'Torsten Seemann <torsten.seem...@gmail.com>'; - my $URL = 'https://github.com/Victorian-Bioinformatics-Consortium/barrnap'; + my $URL = 'https://github.com/tseemann/barrnap'; my $DBDIR = "$FindBin::RealBin/../db"; +if ( ! -e $DBDIR) { + $DBDIR = "/usr/share/barrnap/db"; +} my $OPSYS = $^O; - my $NHMMER = "$FindBin::RealBin/../binaries/$OPSYS/nhmmer"; -- -+if ( ! -e $NHMMER ) { -+ $NHMMER = "/usr/bin/nhmmer"; -+} - my %KINGDOM = (map { substr($_,0,1) => $_ } qw(bac arc euk mito)); - my %LENG = ( - "5S_rRNA" =>119, "16S_rRNA"=>1585, "23S_rRNA"=>3232, + my $BINDIR = "$FindBin::RealBin/../binaries/$OPSYS"; + -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/barrnap.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit