This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository iqtree.
from e8d6855 Upload to unstable new 73a82c8 New upstream version 1.5.5+dfsg new e020f33 Merge tag 'upstream/1.5.5+dfsg' new 43436d5 New upstream version The 3 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Summary of changes: CMakeLists.txt | 105 +++++++++---- alignment.cpp | 284 ++++++++++++++++++--------------- alignment.h | 11 +- checkpoint.cpp | 4 +- checkpoint.h | 9 +- constrainttree.cpp | 48 ++++-- constrainttree.h | 15 +- debian/changelog | 6 + iqtree.cpp | 33 ++-- mexttree.cpp | 10 +- mexttree.h | 2 +- model/modelcodon.cpp | 35 +++-- model/modelfactory.cpp | 20 ++- model/modelfactory.h | 4 +- ngs.cpp | 2 +- pda.cpp | 82 +++++----- phyloanalysis.cpp | 214 +++++++++++++++++-------- phylokernel.h | 8 +- phylokernelfma.cpp | 16 +- phylokernelnew.h | 414 +++++++++++++++++++++++++++++-------------------- phylokernelsse.cpp | 16 +- phylosupertree.cpp | 4 +- phylosupertreeplen.cpp | 27 +++- phylosupertreeplen.h | 2 + phylotesting.cpp | 104 +++++++++---- phylotesting.h | 9 +- phylotree.cpp | 141 +++++++++++++++-- phylotree.h | 35 ++--- phylotreeavx.cpp | 16 +- phylotreesse.cpp | 30 ++-- superalignment.cpp | 130 ++++++++++------ superalignment.h | 7 + tools.cpp | 185 +++++++++++++--------- tools.h | 27 +++- 34 files changed, 1330 insertions(+), 725 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/iqtree.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit