This is an automated email from the git hooks/post-receive script. kloetzl-guest pushed a commit to branch master in repository indelible.
commit ad2778d5af7709ccb75205dba5918a4af4568d69 Author: Fabian Klötzl <[email protected]> Date: Mon Oct 2 15:01:15 2017 +0200 remove unnecessary whitespace from the end of sequences --- .../0004-added-auto-tools-build-system.patch | 2 +- ...cessary-whitespace-from-the-end-of-sequen.patch | 66 ++++++++++++++++++++++ debian/patches/series | 1 + 3 files changed, 68 insertions(+), 1 deletion(-) diff --git a/debian/patches/0004-added-auto-tools-build-system.patch b/debian/patches/0004-added-auto-tools-build-system.patch index 20b2ee5..6151ded 100644 --- a/debian/patches/0004-added-auto-tools-build-system.patch +++ b/debian/patches/0004-added-auto-tools-build-system.patch @@ -13,7 +13,7 @@ I added files for autoconf and automake to help with the installation. diff --git a/Makefile.am b/Makefile.am new file mode 100644 -index 0000000..26441f1 +index 0000000..dd11268 --- /dev/null +++ b/Makefile.am @@ -0,0 +1,30 @@ diff --git a/debian/patches/0005-remove-unnecessary-whitespace-from-the-end-of-sequen.patch b/debian/patches/0005-remove-unnecessary-whitespace-from-the-end-of-sequen.patch new file mode 100644 index 0000000..68040b0 --- /dev/null +++ b/debian/patches/0005-remove-unnecessary-whitespace-from-the-end-of-sequen.patch @@ -0,0 +1,66 @@ +From: =?utf-8?q?Fabian_Kl=C3=B6tzl?= <[email protected]> +Date: Mon, 2 Oct 2017 14:56:30 +0200 +Subject: remove unnecessary whitespace from the end of sequences + +--- + src/indelible.cpp | 12 ++++++------ + 1 file changed, 6 insertions(+), 6 deletions(-) + +diff --git a/src/indelible.cpp b/src/indelible.cpp +index 75ce82a..8c4a696 100644 +--- a/src/indelible.cpp ++++ b/src/indelible.cpp +@@ -3771,7 +3771,7 @@ void printresultsout(int currentrep, string filenamestub, int ntaxa, int myleng + // PrintProgress2( blocknumber, numberofevolveblocks, thisrep, reps, printcount); + + for(int j=0; j<TsequencesINT.size(); j++) makeprintseqLEAF(j,lastlengthcount, (TinsPOS.at(j)).at(i), (TsequencesINT.at(j)).at(i), (TinsINT.at(j)).at(i), i, (*results), (*results2), 0) ; +- (*results)<<" "<<endl; (*results2)<<" "<<endl; ++ (*results)<<endl; (*results2)<<endl; + } + + //cout<<endl; +@@ -3809,7 +3809,7 @@ if(ancestralprint) + // PrintProgress2( blocknumber, numberofevolveblocks, thisrep, reps, printcount); + + for(int j=0; j<TsequencesINT.size(); j++) makeprintseqINT(j,lastlengthcount, (TinsPOS.at(j)).at(i), (TsequencesINT.at(j)).at(i),(TinsINT.at(j)).at(i),i,(*results3), 1); +- (*results3)<<" "<<endl; ++ (*results3)<<endl; + + //} + +@@ -3827,7 +3827,7 @@ if(ancestralprint) + // cout<<" Printing root."<<endl; + + for(int j=0; j<TsequencesINT.size(); j++) makeprintseqINT(j,lastlengthcount, (TinsPOS.at(j)).at(0), (TsequencesINT.at(j)).at(0),(TinsINT.at(j)).at(0),0,*results3, 1); +- (*results3)<<" "<<endl; ++ (*results3)<<endl; + } + else + { +@@ -3853,7 +3853,7 @@ if(ancestralprint) + // PrintProgress2( blocknumber, numberofevolveblocks, thisrep, reps, printcount); + + for(int j=0; j<TsequencesINT.size(); j++) makeprintseqINT(j,lastlengthcount, (TinsPOS.at(j)).at(i), (TsequencesINT.at(j)).at(i),(TinsINT.at(j)).at(i),i,*results, 1); +- (*results)<<" "<<endl; ++ (*results)<<endl; + + } + +@@ -3871,7 +3871,7 @@ if(ancestralprint) + // cout<<" Printing root."<<endl; + + for(int j=0; j<TsequencesINT.size(); j++) makeprintseqINT(j,lastlengthcount, (TinsPOS.at(j)).at(0), (TsequencesINT.at(j)).at(0),(TinsINT.at(j)).at(0),0,*results, 1); +- (*results)<<" "<<endl; ++ (*results)<<endl; + + } + +@@ -3885,7 +3885,7 @@ if(ancestralprint) + + if(fileperrep) (*results)<<paupend; else (*results)<<paupmiddle; + +- (*results)<<" "<<endl;(*results2)<<" "<<endl; ++ (*results)<<endl;(*results2)<<endl; + + + diff --git a/debian/patches/series b/debian/patches/series index 5cf56d6..a60b50c 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -2,3 +2,4 @@ 0002-added-documentation-index-page.patch 0003-added-manpage.patch 0004-added-auto-tools-build-system.patch +0005-remove-unnecessary-whitespace-from-the-end-of-sequen.patch -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/indelible.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
