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commit d63dc767a8c86441d895cfb5e162887e18217cef Merge: 9d05111 110e4fe Author: Sascha Steinbiss <sa...@debian.org> Date: Mon Feb 5 09:46:36 2018 +0100 Update upstream source from tag 'upstream/2.11.0+ds' Update to upstream version '2.11.0+ds' with Debian dir 7200ef6565e77a74e718f6d6ef70a60a1d8fc91a README.md | 122 ++++++++--- ariba/assembly.py | 114 +++++++++- ariba/cluster.py | 95 ++++++--- ariba/clusters.py | 199 +++++++++++------- ariba/common.py | 10 +- ariba/external_progs.py | 16 +- ariba/mic_plotter.py | 2 + ariba/tasks/run.py | 4 +- ariba/tests/assembly_test.py | 48 ++++- ariba/tests/cluster_test.py | 72 +++++-- ...mbly_test_assemble_with_spades_fails_reads_1.fq | 4 + ...mbly_test_assemble_with_spades_fails_reads_2.fq | 5 + .../assembly_test_assemble_with_spades_reads_1.fq | 232 +++++++++++++++++++++ .../assembly_test_assemble_with_spades_reads_2.fq | 232 +++++++++++++++++++++ .../assembly_test_check_spades_log_file.log.bad | 5 + .../assembly_test_check_spades_log_file.log.good | 5 + scripts/ariba | 6 + setup.py | 2 +- 18 files changed, 1012 insertions(+), 161 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/ariba.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit