Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq
Commits: d8056e04 by Michael R. Crusoe at 2018-02-11T04:45:47-08:00 fix watch - - - - - 20fbb211 by Michael R. Crusoe at 2018-02-11T04:55:06-08:00 New upstream version 2.5.1+dfsg - - - - - d5a2e951 by Michael R. Crusoe at 2018-02-11T04:55:38-08:00 Update upstream source from tag 'upstream/2.5.1+dfsg' Update to upstream version '2.5.1+dfsg' with Debian dir c8feebbacd500a9a363220ddc8fe113ac040322b - - - - - 3773d9b0 by Michael R. Crusoe at 2018-02-11T05:08:05-08:00 2.5.1+dfsg - - - - - 45363394 by Michael R. Crusoe at 2018-02-11T09:14:29-08:00 Re-add NeedlemanWunschGotohBanded & fix namespace - - - - - 21 changed files: - .gitmodules - + Analysis/DifferentialExpression/DTE_to_DTU.pl - + Analysis/DifferentialExpression/GOplot.Rscript - + Analysis/DifferentialExpression/Glimma.Trinity.Rscript - Analysis/DifferentialExpression/PtR - Analysis/DifferentialExpression/R/misc_rnaseq_funcs.R - Analysis/DifferentialExpression/R/rnaseq_plot_funcs.R - + Analysis/DifferentialExpression/R/vioplot2.R - Analysis/DifferentialExpression/analyze_diff_expr.pl - + Analysis/DifferentialExpression/plot_all_DE_MAplots.Rscript - + Analysis/DifferentialExpression/plot_all_DE_volcanos.Rscript - + Analysis/DifferentialExpression/prep_n_run_GOplot.pl - + Analysis/DifferentialExpression/prune_isoforms_fasta.pl - + Analysis/DifferentialExpression/prune_isoforms_gtf.pl - Analysis/DifferentialExpression/run_DE_analysis.pl - Analysis/DifferentialExpression/run_GOseq.pl - + Analysis/DifferentialExpression/validate_UP_subset.Rscript - Analysis/FL_reconstruction_analysis/FL_trans_analysis_pipeline.pl - Analysis/FL_reconstruction_analysis/util/blat_full_length_mappings.pl - + Analysis/FL_reconstruction_analysis/util/blat_psl_to_align_summary_stats.pl - + Analysis/FL_reconstruction_analysis/util/blat_query_top_hit_extractor.pl The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/compare/cd46bb1150f3fc470888efa37a4b37abce3719ce...45363394b4b284c0cb9012dc5bb10aa36d9bf1a6 --- View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/compare/cd46bb1150f3fc470888efa37a4b37abce3719ce...45363394b4b284c0cb9012dc5bb10aa36d9bf1a6 You're receiving this email because of your account on salsa.debian.org.
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