Andreas Tille pushed to branch master at Debian Med / snap
Commits: 4f06b07a by Andreas Tille at 2018-05-08T07:39:41+02:00 Forwarded patches upstream - - - - - 8 changed files: - debian/patches/build-with-gcc-6.patch - debian/patches/fix_missing_braces_in_if_statements.patch - debian/patches/gcc-8.patch - debian/patches/hardening.patch - debian/patches/replace_itoa_with_broken_indentation.patch - debian/patches/spelling.patch - debian/patches/unused-but-set-variable.patch - debian/patches/use-CC.patch Changes: ===================================== debian/patches/build-with-gcc-6.patch ===================================== --- a/debian/patches/build-with-gcc-6.patch +++ b/debian/patches/build-with-gcc-6.patch @@ -1,6 +1,7 @@ Author: Sascha Steinbiss <[email protected]> Last-Update: Sat, 30 Apr 2016 17:48:14 +0100 Bug-Debian: https://bugs.debian.org/812011 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: changing the (likely buggy) behaviour of the zoeHSPCmpQuery and zoeHSPCmpSbjct functions to do the correct comparisons. This fixes: error: self-comparison always evaluates to false [-Werror=tautological-compare] ===================================== debian/patches/fix_missing_braces_in_if_statements.patch ===================================== --- a/debian/patches/fix_missing_braces_in_if_statements.patch +++ b/debian/patches/fix_missing_braces_in_if_statements.patch @@ -1,6 +1,7 @@ Author: Andreas Tille <[email protected]> Last-Update: Wed, 24 Aug 2016 10:43:36 +0200 Bug-Debian: https://bugs.debian.org/835283 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: add missing braces --- a/exonpairs.c ===================================== debian/patches/gcc-8.patch ===================================== --- a/debian/patches/gcc-8.patch +++ b/debian/patches/gcc-8.patch @@ -1,5 +1,6 @@ Description: Enlarge too short target string for sprintf Bug-Debian: https://bugs.debian.org/897864 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Author: Andreas Tille <[email protected]> Last-Update: Mon, 07 May 2018 23:38:54 +0200 ===================================== debian/patches/hardening.patch ===================================== --- a/debian/patches/hardening.patch +++ b/debian/patches/hardening.patch @@ -1,5 +1,6 @@ Author: Andreas Tille <[email protected]> LastChanged: Fri, 25 Oct 2013 16:39:26 +0200 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: Propagate Hardening options --- a/Makefile ===================================== debian/patches/replace_itoa_with_broken_indentation.patch ===================================== --- a/debian/patches/replace_itoa_with_broken_indentation.patch +++ b/debian/patches/replace_itoa_with_broken_indentation.patch @@ -1,5 +1,6 @@ Author: Andreas Tille <[email protected]> Last-Update: Wed, 24 Aug 2016 10:43:36 +0200 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: itoa implementation had broken indentation - use sprintf instead ===================================== debian/patches/spelling.patch ===================================== --- a/debian/patches/spelling.patch +++ b/debian/patches/spelling.patch @@ -1,5 +1,6 @@ Description: Fix spelling Author: Andreas Tille <[email protected]> +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Last-Update: Mon, 07 May 2018 23:38:54 +0200 --- a/Zoe/zoePhasePref.c ===================================== debian/patches/unused-but-set-variable.patch ===================================== --- a/debian/patches/unused-but-set-variable.patch +++ b/debian/patches/unused-but-set-variable.patch @@ -1,5 +1,6 @@ Author: Andreas Tille <[email protected]> Date: Tue, 07 Oct 2014 13:31:52 +0200 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: When enabling hardening flags by using debhelper 9 unsused variables should not be assigned. This patch comments those variables. ===================================== debian/patches/use-CC.patch ===================================== --- a/debian/patches/use-CC.patch +++ b/debian/patches/use-CC.patch @@ -2,6 +2,7 @@ Author: Sascha Steinbiss <[email protected]>, Helmut Grohne <[email protected]> Last-Update: Fri, 8 Dec 2017 22:32:22 +0100 Bug-Debian: https://bugs.debian.org/883891 +Forwarded-Upstream: https://github.com/KorfLab/SNAP/issues/3 Description: Do not force gcc explicitly but use $(CC) instead --- a/Zoe/Makefile View it on GitLab: https://salsa.debian.org/med-team/snap/commit/4f06b07aba4f09ce9a57ba03305c9c5bf835495a --- View it on GitLab: https://salsa.debian.org/med-team/snap/commit/4f06b07aba4f09ce9a57ba03305c9c5bf835495a You're receiving this email because of your account on salsa.debian.org.
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