Andreas Tille pushed to branch master at Debian Med / soapaligner
Commits: 17b1b106 by Andreas Tille at 2018-06-30T07:13:50+02:00 Drop -msse3 from compiler options - - - - - 9c5441ce by Andreas Tille at 2018-06-30T07:14:36+02:00 debhelper 11 - - - - - cfb6594a by Andreas Tille at 2018-06-30T07:14:43+02:00 Standards-Version: 4.1.4 - - - - - 2be3504d by Andreas Tille at 2018-06-30T07:19:59+02:00 DEP3 - - - - - 0cd3fe05 by Andreas Tille at 2018-06-30T07:21:56+02:00 hardening=+all - - - - - e56a4867 by Andreas Tille at 2018-06-30T07:22:55+02:00 Upload to unstable - - - - - 7 changed files: - debian/changelog - debian/compat - debian/control - debian/patches/UsageDoublette.patch - debian/patches/compiler_options.patch - debian/patches/linkerror.patch - debian/rules Changes: ===================================== debian/changelog ===================================== --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,15 @@ +soapaligner (2.20-2) unstable; urgency=medium + + * Team upload. + * Drop -msse3 from compiler options + Closes: #902129 + * debhelper 11 + * Standards-Version: 4.1.4 + * DEP3 + * hardening=+all + + -- Andreas Tille <[email protected]> Sat, 30 Jun 2018 07:22:04 +0200 + soapaligner (2.20-1) unstable; urgency=low [ Steffen Moeller ] ===================================== debian/compat ===================================== --- a/debian/compat +++ b/debian/compat @@ -1 +1 @@ -10 +11 ===================================== debian/control ===================================== --- a/debian/control +++ b/debian/control @@ -3,8 +3,8 @@ Maintainer: Debian Med Packaging Team <[email protected]. Uploaders: Steffen Moeller <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 10) -Standards-Version: 4.1.3 +Build-Depends: debhelper (>= 11~) +Standards-Version: 4.1.4 Vcs-Browser: https://salsa.debian.org/med-team/soapaligner Vcs-Git: https://salsa.debian.org/med-team/soapaligner.git Homepage: http://soap.genomics.org.cn/soapaligner.html ===================================== debian/patches/UsageDoublette.patch ===================================== --- a/debian/patches/UsageDoublette.patch +++ b/debian/patches/UsageDoublette.patch @@ -1,3 +1,7 @@ +Author: Steffen Moeller +Last-Update: 2018-05-04 18:33:03 +0200 +Description: Deal with doublette of Usage function by making it static + Index: soapaligner/soap.c =================================================================== --- soapaligner.orig/soap.c ===================================== debian/patches/compiler_options.patch ===================================== --- a/debian/patches/compiler_options.patch +++ b/debian/patches/compiler_options.patch @@ -1,3 +1,7 @@ +Author: Steffen Moeller +Last-Update: 2018-05-04 18:33:03 +0200 +Description: Adapt Makefile to accept Debian preset compiler options + Index: soapaligner/Makefile =================================================================== --- soapaligner.orig/Makefile @@ -24,7 +28,7 @@ Index: soapaligner/Makefile +CC ?= gcc +DEBUG_FLAGS ?= -g3 -Wall -O2 +PROFILE_FLAGS ?= -fprofile-arcs -ftest-coverage -pg -+RELEASE_FLAGS ?= -msse3 -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer ++RELEASE_FLAGS ?= -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer +STATIC_FLAGS ?= -static +DFLAGS ?= -DMAKE_TIME=\""`date`"\" +LDFLAGS ?= ===================================== debian/patches/linkerror.patch ===================================== --- a/debian/patches/linkerror.patch +++ b/debian/patches/linkerror.patch @@ -1,3 +1,7 @@ +Author: Steffen Moeller +Last-Update: 2018-05-04 18:33:03 +0200 +Description: Fix build + Index: soapaligner/Makefile =================================================================== --- soapaligner.orig/Makefile ===================================== debian/rules ===================================== --- a/debian/rules +++ b/debian/rules @@ -9,5 +9,7 @@ export CFLAGS += -flto export CXXFLAGS += -flto export LDFLAGS += -Wl,-flto +export DEB_BUILD_MAINT_OPTIONS=hardening=+all + %: dh $@ View it on GitLab: https://salsa.debian.org/med-team/soapaligner/compare/c7933ba918b4afdb0def791a738ac1f38f4f62c8...e56a4867dbe574f42d2aa418ce8c3e515bdb36ae -- View it on GitLab: https://salsa.debian.org/med-team/soapaligner/compare/c7933ba918b4afdb0def791a738ac1f38f4f62c8...e56a4867dbe574f42d2aa418ce8c3e515bdb36ae You're receiving this email because of your account on salsa.debian.org.
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