Andreas Tille pushed to branch master at Debian Med / ncbi-igblast
Commits: 94d2dbd0 by David Miguel Susano Pinto at 2018-07-17T13:56:35+01:00 Initial packaging of ncbi-igblast - - - - - 8 changed files: - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/rules - + debian/source/format - + debian/upstream/metadata - + debian/watch Changes: ===================================== debian/changelog ===================================== --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +ncbi-igblast (1.9.0-1) UNRELEASED; urgency=low + + * Initial Release. (Closes: #903965) + + -- David Miguel Susano Pinto <[email protected]> Wed, 11 Jul 2018 18:22:32 +0100 ===================================== debian/compat ===================================== --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +11 ===================================== debian/control ===================================== --- /dev/null +++ b/debian/control @@ -0,0 +1,24 @@ +Source: ncbi-igblast +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: David Miguel Susano Pinto <[email protected]> +Build-Depends: debhelper (>= 11) +Build-Depends-Indep: +Standards-Version: 4.1.5 +Vcs-Browser: https://salsa.debian.org/med-team/ncbi-igblast +Vcs-Git: https://salsa.debian.org/med-team/igblast.git +Homepage: https://ncbi.github.io/igblast/ + +Package: ncbi-igblast +Architecture: any +Depends: +Description: Immunoglobulin and T cell receptor variable domain sequence analysis + IgBLAST allows users to view the matches to the germline V, D, and J + genes, details at rearrangement junctions, the delineation of IG V + domain framework regions, and complementarity determining regions. + IgBLAST has the capability to analyse nucleotide and protein + sequences, and can process sequences in batches. Furthermore, + IgBLAST allows searches against the germline gene databases and other + sequence databases simultaneously to minimize the chance of missing + possibly the best matching germline V gene. ===================================== debian/copyright ===================================== --- /dev/null +++ b/debian/copyright @@ -0,0 +1,31 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Source: https://ftp.ncbi.nih.gov/blast/executables/igblast/release/ +Upstream-Contact: [email protected] +Upstream-Name: NCBI + +Files: * +Copyright: 2018, National Center for Biotechnology Information +License: PD + +Files: debian/* +Copyright: 2018, David Miguel Susano Pinto <[email protected]> +License: GPL-3+ + +License: PD + PUBLIC DOMAIN NOTICE + National Center for Biotechnology Information + . + This software/database is a "United States Government Work" under the + terms of the United States Copyright Act. It was written as part of + the author's official duties as a United States Government employee and + thus cannot be copyrighted. This software/database is freely available + to the public for use. The National Library of Medicine and the U.S. + Government have not placed any restriction on its use or reproduction. + . + Although all reasonable efforts have been taken to ensure the accuracy + and reliability of the software and data, the NLM and the U.S. + Government do not and cannot warrant the performance or results that + may be obtained by using this software or data. The NLM and the U.S. + Government disclaim all warranties, express or implied, including + warranties of performance, merchantability or fitness for any particular + purpose. ===================================== debian/rules ===================================== --- /dev/null +++ b/debian/rules @@ -0,0 +1,4 @@ +#!/usr/bin/make -f + +%: + dh $@ ===================================== debian/source/format ===================================== --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) ===================================== debian/upstream/metadata ===================================== --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,9 @@ +--- +Webservice: https://www.ncbi.nlm.nih.gov/igblast/ +Registry: + - Name: bio.tools + Entry: igblast + - Name: OMICtools + Entry: OMICS_06083 + - Name: SciCrunch + Entry: SCR_002873 ===================================== debian/watch ===================================== --- /dev/null +++ b/debian/watch @@ -0,0 +1,3 @@ +version=4 +https://ftp.ncbi.nlm.nih.gov/blast/executables/igblast/release/LATEST/ \ + ncbi-igblast-(.*)-src.tar.gz View it on GitLab: https://salsa.debian.org/med-team/ncbi-igblast/commit/94d2dbd0081ec6d1eeaca47a35dac1c553b7fcaf -- View it on GitLab: https://salsa.debian.org/med-team/ncbi-igblast/commit/94d2dbd0081ec6d1eeaca47a35dac1c553b7fcaf You're receiving this email because of your account on salsa.debian.org.
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