Andreas Tille pushed to branch master at Debian Med / dssp
Commits: feee192a by Andreas Tille at 2018-10-28T10:10:49Z debhelper 11 - - - - - b6c80997 by Andreas Tille at 2018-10-28T10:10:54Z Point Vcs fields to salsa.debian.org - - - - - 7a394b91 by Andreas Tille at 2018-10-28T10:10:54Z Standards-Version: 4.2.1 - - - - - 16e4bee9 by Andreas Tille at 2018-10-28T10:10:54Z Secure URI in copyright format - - - - - 414e996b by Andreas Tille at 2018-10-28T10:10:54Z Remove trailing whitespace in debian/copyright - - - - - a3e93e9d by Andreas Tille at 2018-10-28T10:21:06Z Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/compat - debian/control - debian/copyright Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +dssp (3.0.0-3) unstable; urgency=medium + + * debhelper 11 + * Point Vcs fields to salsa.debian.org + * Standards-Version: 4.2.1 + * Secure URI in copyright format + * Remove trailing whitespace in debian/copyright + + -- Andreas Tille <[email protected]> Sun, 28 Oct 2018 11:18:40 +0100 + dssp (3.0.0-2) unstable; urgency=medium * Team upload ===================================== debian/compat ===================================== @@ -1 +1 @@ -10 +11 ===================================== debian/control ===================================== @@ -5,15 +5,15 @@ Uploaders: Maarten L. Hekkelman <[email protected]>, Andreas Tille <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 10), +Build-Depends: debhelper (>= 11~), libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-system-dev, libboost-thread-dev -Standards-Version: 4.1.1 -Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/dssp.git -Vcs-Git: https://anonscm.debian.org/git/debian-med/dssp.git +Standards-Version: 4.2.1 +Vcs-Browser: https://salsa.debian.org/med-team/dssp +Vcs-Git: https://salsa.debian.org/med-team/dssp.git Homepage: http://www.cmbi.ru.nl/dssp.html Package: dssp ===================================== debian/copyright ===================================== @@ -1,10 +1,10 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: DSSP Upstream-Contact: Maarten L. Hekkelman <[email protected]> Source: http://www.cmbi.ru.nl/dssp/ Files: * -Copyright: © 2009-2012, Maarten L. Hekkelman <[email protected]> +Copyright: © 2009-2012, Maarten L. Hekkelman <[email protected]> License: Boost-1.0 Files: debian/* @@ -14,27 +14,27 @@ License: Boost-1.0 Files: debian/examples/5bmg.pdb Copyright: © 2016, Cunningham, T.F., Pornsuwan, S., Horne, W.S., Saxena, S. License: PDB -Comment: full protein structure in PDB format from RCSB PDB database +Comment: full protein structure in PDB format from RCSB PDB database PDB ID: 5bmg, available at: http://www.rcsb.org Files: debian/examples/2OSL_fragment.pdb -Copyright: © 2007, Du, J., Wang, H., Zhong, C., Peng, B., Zhang, M., Li, B., +Copyright: © 2007, Du, J., Wang, H., Zhong, C., Peng, B., Zhang, M., Li, B., Huo, S., Guo, Y., Ding, J. License: PDB Comment: a fragment of protein structure from RCSB PDB database. PDB ID: 2osl, available at: http://www.rcsb.org . - Contains only a small portion of corresponding file (with PDB ID "2osl") - - PDB file's "ATOM" section information about first 4 aminoacid atoms for each - of 2 different chains (namely, 'L' and 'H' chains). + Contains only a small portion of corresponding file (with PDB ID "2osl") - + PDB file's "ATOM" section information about first 4 aminoacid atoms for each + of 2 different chains (namely, 'L' and 'H' chains). . - Fragmented PDB sample is used for package testing purposes - it shows that - algorithm needs only specific .pdb file portion (atom coordinates from "ATOM" - section) for processing and obtaining some results (while with this short + Fragmented PDB sample is used for package testing purposes - it shows that + algorithm needs only specific .pdb file portion (atom coordinates from "ATOM" + section) for processing and obtaining some results (while with this short fragment these results can be almost meaningless because chain fragments are too short). . - Can be replaced by any other PDB file or PDB file fragment with atom + Can be replaced by any other PDB file or PDB file fragment with atom coordinates. License: Boost-1.0 @@ -61,17 +61,17 @@ License: Boost-1.0 FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. - + License: PDB PDB File License - as described in RCSB PDB site - June 17, 2016 . - Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all - copyright restrictions and made fully and freely available for both - non-commercial and commercial use. Users of the data should attribute the - original authors of that structural data. By using the materials available in - the PDB archive, the user agrees to abide by the conditions described in the + Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all + copyright restrictions and made fully and freely available for both + non-commercial and commercial use. Users of the data should attribute the + original authors of that structural data. By using the materials available in + the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice (http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/pdb_advisory.html). . - License's text is available on RCSB PDB database site (http://www.rcsb.org), on page named + License's text is available on RCSB PDB database site (http://www.rcsb.org), on page named "RCSB PDB Policies & References". URL: http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/policies_references.html View it on GitLab: https://salsa.debian.org/med-team/dssp/compare/6157eb182eab9ba3388bbe131317d5c232a590bb...a3e93e9d4b8bc1c64ba07304e9854a0b55aa4d38 -- View it on GitLab: https://salsa.debian.org/med-team/dssp/compare/6157eb182eab9ba3388bbe131317d5c232a590bb...a3e93e9d4b8bc1c64ba07304e9854a0b55aa4d38 You're receiving this email because of your account on salsa.debian.org.
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