Michael R. Crusoe pushed to branch debian/experimental at Debian Med / htslib
Commits: c6579182 by Michael R. Crusoe at 2018-12-18T08:38:50Z try suggestion from https://github.com/samtools/htslib/issues/565#issuecomment-448028771 - - - - - 4 changed files: - debian/changelog - debian/control - + debian/htslib-test.lintian-overrides - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +htslib (1.9-7~1~i386~1) experimental; urgency=medium + + * Turn on SSE for i386, as suggested at + https://github.com/samtools/htslib/issues/565#issuecomment-448028771 + + -- Michael R. Crusoe <[email protected]> Tue, 18 Dec 2018 00:27:40 -0800 + htslib (1.9-7~0~i386~gcc7~1) experimental; urgency=medium * Try dropping to gcc-7 on i386* ===================================== debian/control ===================================== @@ -6,7 +6,6 @@ Uploaders: Charles Plessy <[email protected]>, Section: science Priority: optional Build-Depends: debhelper (>= 11~), - gcc-7 [i386 kfreebsd-i386 hurd-i386], dh-exec, libbz2-dev, libcurl4-gnutls-dev, ===================================== debian/htslib-test.lintian-overrides ===================================== @@ -0,0 +1,2 @@ +# As needed for testing +duplicated-compressed-file usr/share/htslib-test/test/bgziptest.txt.gz ===================================== debian/rules ===================================== @@ -8,12 +8,9 @@ export DH_VERBOSE=1 include /usr/share/dpkg/default.mk ifneq (,$(filter $(DEB_HOST_ARCH),i386 kfreebsd-i386 hurd-i386)) - export DEB_CFLAGS_MAINT_APPEND=-fno-strict-aliasing -fno-code-hoisting - export CC=gcc-7 -else - export CC=gcc + DEB_CFLAGS_MAINT_APPEND=-msse -mfpmath=sse endif -DEB_CFLAGS_MAINT_APPEND+=-flto +export DEB_CFLAGS_MAINT_APPEND+=-flto export DEB_LDFLAGS_MAINT_APPEND+=-Wl,-flto %: @@ -26,7 +23,7 @@ override_dh_auto_configure: dh_auto_configure -- --enable-libcurl override_dh_auto_build: - dh_auto_build -- CC=$(CC)\ + dh_auto_build -- \ CFLAGS="$$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="-I. -DSAMTOOLS=1 $$(dpkg-buildflags --get CPPFLAGS)" \ LDFLAGS="$$(dpkg-buildflags --get LDFLAGS)" \ View it on GitLab: https://salsa.debian.org/med-team/htslib/commit/c6579182471e49b2877cd575738661e7ca075743 -- View it on GitLab: https://salsa.debian.org/med-team/htslib/commit/c6579182471e49b2877cd575738661e7ca075743 You're receiving this email because of your account on salsa.debian.org.
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