Andreas Tille pushed to branch master at Debian Med / hhsuite
Commits: 4495fc49 by Andreas Tille at 2019-01-09T07:44:06Z Install context_data.crf - - - - - 26dd09fe by Andreas Tille at 2019-01-09T07:46:55Z Add autopkgtest reproducing the issue of bug #918765 - - - - - 798d03ee by Andreas Tille at 2019-01-09T07:47:24Z debhelper 11 - - - - - f74c1aa9 by Andreas Tille at 2019-01-09T07:48:06Z Standards-Version: 4.3.0 - - - - - 103d3da9 by Andreas Tille at 2019-01-09T07:48:07Z Secure URI in copyright format - - - - - f7092112 by Andreas Tille at 2019-01-09T07:48:07Z Remove trailing whitespace in debian/copyright - - - - - ffd60294 by Andreas Tille at 2019-01-09T07:53:50Z Do not parse d/changelog - - - - - 9 changed files: - debian/changelog - debian/compat - debian/control - debian/copyright - debian/hhsuite-data.install - debian/hhsuite-data.links - debian/rules - + debian/tests/control - + debian/tests/run-unit-test Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,18 @@ +hhsuite (3.0~beta3+dfsg-2) UNRELEASED; urgency=medium + + * Team upload. + * Install context_data.crf (Thanks for the patch to Andrius Merkys + <[email protected]>) + Closes: #918765 + * Add autopkgtest reproducing the issue of bug #918765 + * debhelper 11 + * Standards-Version: 4.3.0 + * Secure URI in copyright format + * Remove trailing whitespace in debian/copyright + * Do not parse d/changelog + + -- Andreas Tille <[email protected]> Wed, 09 Jan 2019 08:43:24 +0100 + hhsuite (3.0~beta3+dfsg-1) unstable; urgency=medium [ Steffen Moeller ] ===================================== debian/compat ===================================== @@ -1 +1 @@ -10 +11 ===================================== debian/control ===================================== @@ -5,14 +5,14 @@ Uploaders: Laszlo Kajan <[email protected]>, Sascha Steinbiss <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 10), +Build-Depends: debhelper (>= 11~), libffindex0-dev (>= 0.9.9.7+soedinglab), cmake, texlive-latex-base, texlive-latex-recommended, imagemagick, help2man -Standards-Version: 4.2.0 +Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/hhsuite Vcs-Git: https://salsa.debian.org/med-team/hhsuite.git Homepage: https://toolkit.tuebingen.mpg.de/ ===================================== debian/copyright ===================================== @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: hhsuite Upstream-Contact: Andreas Hauser <[email protected]> Johannes Soeding <[email protected]> @@ -49,7 +49,7 @@ License: Sandia license for use of this work by or on behalf of the U.S. Government. Redistribution and use in source and binary forms, with or without modification, are permitted provided that this Notice and any - statement of authorship are reproduced on all copies. + statement of authorship are reproduced on all copies. License: GPL-3.0+ This program is free software: you can redistribute it and/or modify ===================================== debian/hhsuite-data.install ===================================== @@ -1,4 +1,2 @@ -usr/data/context_data.lib usr/share/hhsuite/data +usr/data/context_data.* usr/share/hhsuite/data usr/data/cs219.lib usr/share/hhsuite/data -usr/data/context_data.lib usr/lib/hhsuite/data -usr/data/cs219.lib usr/lib/hhsuite/data ===================================== debian/hhsuite-data.links ===================================== @@ -1,2 +1,3 @@ -usr/share/hhsuite/data/context_data.lib usr/lib/hhsuite/data/context_data.lib -usr/share/hhsuite/data/cs219.lib usr/lib/hhsuite/data/cs219.lib +usr/share/hhsuite/data/context_data.lib usr/lib/hhsuite/data/context_data.lib +usr/share/hhsuite/data/context_data.crf usr/lib/hhsuite/data/context_data.crf +usr/share/hhsuite/data/cs219.lib usr/lib/hhsuite/data/cs219.lib ===================================== debian/rules ===================================== @@ -6,9 +6,7 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all #export DH_VERBOSE=1 include /usr/share/dpkg/default.mk - -TIMESTAMP=$(shell dpkg-parsechangelog -STimestamp) -DATE=$(shell date --date=@$(TIMESTAMP) '+%d %B %Y') +DATE=$(shell date --date=@$(SOURCE_DATE_EPOCH) '+%d %B %Y') HHMANPAGES = hhalign.1 hhblits.1 hhblits_omp.1 hhconsensus.1 hhfilter.1 hhmake.1 hhsearch.1 ===================================== debian/tests/control ===================================== @@ -0,0 +1,3 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr ===================================== debian/tests/run-unit-test ===================================== @@ -0,0 +1,17 @@ +#!/bin/bash +set -e + +pkg=hhsuite + +if [ "$AUTOPKGTEST_TMP" = "" ] ; then + AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` + trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM +fi + +cp -a /usr/share/doc/${pkg}/examples/query.a3m.gz $AUTOPKGTEST_TMP + +cd $AUTOPKGTEST_TMP + +gunzip query.a3m.gz + +hhmake -i query.a3m View it on GitLab: https://salsa.debian.org/med-team/hhsuite/compare/7023c65c4fb9a0bcbcec479d1f39f02f2e440411...ffd60294bd94f6165f8dc4671b4d9137a29a78e3 -- View it on GitLab: https://salsa.debian.org/med-team/hhsuite/compare/7023c65c4fb9a0bcbcec479d1f39f02f2e440411...ffd60294bd94f6165f8dc4671b4d9137a29a78e3 You're receiving this email because of your account on salsa.debian.org.
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