Andreas Tille pushed to branch master at Debian Med / blat
Commits: df9eb27e by Andreas Tille at 2019-04-08T09:31:11Z debhelper 12 - - - - - 4882e612 by Andreas Tille at 2019-04-08T09:34:47Z Point Vcs fields to salsa.debian.org - - - - - bf18a892 by Andreas Tille at 2019-04-08T09:34:47Z Standards-Version: 4.3.0 - - - - - f6c59f37 by Andreas Tille at 2019-04-08T09:34:48Z Secure URI in copyright format - - - - - 1a96963b by Andreas Tille at 2019-04-08T09:35:04Z Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - - - - - cb307b7c by Andreas Tille at 2019-04-08T09:36:24Z Do not parse d/changelog - - - - - 8d32bf58 by Andreas Tille at 2019-04-08T09:39:44Z Remove autogenerated changes - - - - - 5 changed files: - debian/changelog - debian/compat - debian/control - debian/copyright - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,5 +1,5 @@ -blat (35-1) unstable; urgency=low +blat (35-1) UNRELEASED; urgency=low * Initial release (Closes: #740601) - -- Andreas Tille <[email protected]> Wed, 26 Feb 2014 13:52:17 +0100 + -- Andreas Tille <[email protected]> Mon, 08 Apr 2019 11:36:24 +0200 ===================================== debian/compat ===================================== @@ -1 +1 @@ -9 +12 ===================================== debian/control ===================================== @@ -1,18 +1,20 @@ Source: blat -Section: non-free/science -Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Andreas Tille <[email protected]> -Build-Depends: debhelper (>= 9), - libpng12-dev | libpng-dev -Standards-Version: 3.9.5 -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/blat.git -Vcs-Git: git://anonscm.debian.org/debian-med/blat.git +Section: non-free/science +XS-Autobuild: no +Priority: optional +Build-Depends: debhelper (>= 12~), + libpng-dev +Standards-Version: 4.3.0 +Vcs-Browser: https://salsa.debian.org/med-team/blat +Vcs-Git: https://salsa.debian.org/med-team/blat.git Homepage: http://genome.ucsc.edu/cgi-bin/hgBlat Package: blat Architecture: any -Depends: ${shlibs:Depends}, ${misc:Depends} +Depends: ${shlibs:Depends}, + ${misc:Depends} Description: BLAST-Like Alignment Tool BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more. It may miss more divergent or shorter @@ -29,4 +31,3 @@ Description: BLAST-Like Alignment Tool of probable homology, which are then loaded into memory for a detailed alignment. Protein BLAT works in a similar manner, except with 4-mers rather than 11-mers. The protein index takes a little more than 2 gigabytes. - ===================================== debian/copyright ===================================== @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: BLAT Upstream-Contact: Jim Kent <[email protected]> Source: http://users.soe.ucsc.edu/~kent/src/ ===================================== debian/rules ===================================== @@ -2,7 +2,7 @@ DH_VERBOSE := 1 -DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}') +include /usr/share/dpkg/default.mk # alternatively to manually set those variables you can # include /usr/share/cdbs/1/rules/buildvars.mk @@ -10,7 +10,7 @@ DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}') # a similar manner are welcome. MACHTYPE := $(shell dpkg-architecture -qDEB_HOST_GNU_CPU) -DESTDIR := $(CURDIR)/debian/$(DEBPKGNAME)/usr/ +DESTDIR := $(CURDIR)/debian/$(DEB_SOURCE)/usr/ # When using -O2 optimisation the BLAT test (cd blat/test; make) will fail CFLAGS:=$(shell dpkg-buildflags --get CFLAGS | sed 's/-O2/-O1/') @@ -46,5 +46,7 @@ override_dh_auto_install: PATH=$(DESTDIR)/bin:$${PATH} make test override_dh_auto_test: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) echo "Test suite is running after dh_auto_install" echo "Probably it would be better to create a proper install target" +endif View it on GitLab: https://salsa.debian.org/med-team/blat/compare/06fd6949dff5768a4e3a7a8c1b32e656df36d1f5...8d32bf58404029ad30e9c62391daede5984ba883 -- View it on GitLab: https://salsa.debian.org/med-team/blat/compare/06fd6949dff5768a4e3a7a8c1b32e656df36d1f5...8d32bf58404029ad30e9c62391daede5984ba883 You're receiving this email because of your account on salsa.debian.org.
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