Andreas Tille pushed to branch master at Debian Med / atropos
Commits: ac34d285 by Andreas Tille at 2019-04-12T13:46:53Z Fix installation - - - - - 59e7f7b8 by Andreas Tille at 2019-04-12T13:48:17Z Add copyright - - - - - 062f39d6 by Andreas Tille at 2019-04-12T13:48:30Z Nothing to override - - - - - 4 changed files: - debian/control - debian/copyright - − debian/lintian-overrides - debian/rules Changes: ===================================== debian/control ===================================== @@ -19,8 +19,8 @@ Homepage: https://github.com/jdidion/atropos Package: atropos Architecture: any Depends: ${shlibs:Depends}, + ${python3:Depends}, ${misc:Depends}, - python3, python3-pysam Recommends: python3-jinja2 Description: NGS read trimming tool that is specific, sensitive, and speedy ===================================== debian/copyright ===================================== @@ -4,9 +4,46 @@ Source: https://github.com/jdidion/atropos/releases Files-Excluded: *.tar.gz Files: * -Copyright: 20xx-20yy <upstream> -License: <license> +Copyright: 2010-2016 Marcel Martin <[email protected]> + 2016-2019 John P Didion, and are subject to +License: Expat +Comment: Atropos began as a fork of Cutadapt [1]. Specifically, it is a fork of commit + 2f3cc0717aa9ff1e0326ea6bcb36b712950d4999 on June 22, 2016 + . + All additions and non-trivial modifications (which can be discovered by comparing + the Atropos source [2] against [3]) were created by John P Didion, and are subject to + the below copyright wavier: + . + This is a work of the United States Government, and is in the public domain + within the United States. The National Human Genome Research Institute (National + Institutes of Health, Department of Health and Human Services) waives copyright and + related rights in the work worldwide through the CC0 1.0 Universal Public Domain + Dedication [4]. + . + [1] https://github.com/marcelm/cutadapt + [2] https://github.com/jdidion/atropos + [3] https://github.com/marcelm/cutadapt/tree/2f3cc0717aa9ff1e0326ea6bcb36b712950d4999 + [4] https://creativecommons.org/publicdomain/zero/1.0/ Files: debian/* Copyright: 2019 Andreas Tille <[email protected]> -License: <license> +License: Expat + +License: Expat + Permission is hereby granted, free of charge, to any person obtaining a copy + of this software and associated documentation files (the "Software"), to deal + in the Software without restriction, including without limitation the rights + to use, copy, modify, merge, publish, distribute, sublicense, and/or sell + copies of the Software, and to permit persons to whom the Software is + furnished to do so, subject to the following conditions: + . + The above copyright notice and this permission notice shall be included in + all copies or substantial portions of the Software. + . + THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR + IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, + FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE + AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER + LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, + OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN + THE SOFTWARE. ===================================== debian/lintian-overrides deleted ===================================== @@ -1,2 +0,0 @@ -# see https://lists.debian.org/debian-med/2018/06/msg00043.html -#PKGNAME#: script-with-language-extension usr/bin/*.* ===================================== debian/rules ===================================== @@ -17,3 +17,5 @@ endif override_dh_install: dh_install find debian -type d -name __pycache__ | xargs rm -rf + find debian -type d -name tests | xargs rm -rf + find debian -type f -name .adapters -delete View it on GitLab: https://salsa.debian.org/med-team/atropos/compare/a38b582606695b49806ed1e6a4d02216a2d60db4...062f39d62f362b8375b708fca0b8d020f27edb4d -- View it on GitLab: https://salsa.debian.org/med-team/atropos/compare/a38b582606695b49806ed1e6a4d02216a2d60db4...062f39d62f362b8375b708fca0b8d020f27edb4d You're receiving this email because of your account on salsa.debian.org.
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