Steffen Möller pushed to branch master at Debian Med / vienna-rna
Commits: af6e7fb0 by Steffen Moeller at 2020-07-06T18:45:08+02:00 Lintian-error-free - - - - - 6 changed files: - debian/copyright - debian/librna-perl.install - + debian/patches/addHelp2ManWrapper.patch - debian/patches/series - debian/patches/tutorial.patch - debian/rules Changes: ===================================== debian/copyright ===================================== @@ -92,14 +92,6 @@ Files-Excluded: src/RNAlocmin/RNAlocmin_cmdline.h src/RNAlocmin/config.h.in */autom4te.cache - config/compile - config/depcomp - config/install-sh - config/ltmain.sh - config/missing - config/test-driver - config/texinfo.tex - configure doc/refman-html install-sh interfaces/Perl/RNA.pm @@ -143,7 +135,7 @@ License: non-free Files: src/ViennaRNA/naview.c Copyright: 1988 Robert E. Bruccoleri -License: non-free +License: non-commercial Copying of this software, in whole or in part, is permitted provided that the copies are not made for commercial purposes, appropriate credit for the use of the software is given, this @@ -167,9 +159,9 @@ License: non-free_no-fee Files: debian/* Copyright: 2011 Alex Mestiashvili <a...@biotec.tu-dresden.de> - 2011 Andreas Tille <ti...@debian.org> - 2014 Olivier Sallou <osal...@debian.org> - 2019 Steffen Moeller <moel...@debian.org> + 2011 Andreas Tille <ti...@debian.org> + 2014 Olivier Sallou <osal...@debian.org> + 2019-2020 Steffen Moeller <moel...@debian.org> License: GPL-2+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public ===================================== debian/librna-perl.install ===================================== @@ -1 +1 @@ -usr/share/perl +usr/share/perl/*/RNA usr/share/perl5 ===================================== debian/patches/addHelp2ManWrapper.patch ===================================== @@ -0,0 +1,19 @@ +Index: vienna-rna/man/help2manWrapper.sh +=================================================================== +--- /dev/null ++++ vienna-rna/man/help2manWrapper.sh +@@ -0,0 +1,14 @@ ++#!/bin/bash ++# ++ ++HELP2MAN=$1 ++PROGNAME=`basename $2 .ggo` ++PROGPATH=`dirname $2` ++ ++${HELP2MAN} \ ++ -N \ ++ --help-option=--detailed-help \ ++ --opt-include=./include/ref_package.inc \ ++ --opt-include=./include/${PROGNAME}.inc \ ++ --opt-include=./include/ref_energy_par.inc \ ++ "./cmdlopt.sh ${PROGPATH}/${PROGNAME}" ===================================== debian/patches/series ===================================== @@ -1,2 +1,3 @@ g2.patch tutorial.patch +addHelp2ManWrapper.patch ===================================== debian/patches/tutorial.patch ===================================== @@ -2,7 +2,7 @@ Index: vienna-rna/RNA-Tutorial/Makefile.am =================================================================== --- vienna-rna.orig/RNA-Tutorial/Makefile.am +++ vienna-rna/RNA-Tutorial/Makefile.am -@@ -116,11 +116,11 @@ tut_data_DATA = $(srcdir)/Data/5S.seq \ +@@ -111,11 +111,11 @@ tut_data_DATA = $(srcdir)/Data/5S.seq \ $(srcdir)/Data/RNaseP.aln \ $(srcdir)/Data/RNaseP.dnd ===================================== debian/rules ===================================== @@ -7,6 +7,7 @@ override_dh_auto_configure: CFLAGS="-I/usr/include/json-c/ -I/usr/include/libsvm/" CXXFLAGS="-I/usr/include/json-c/ -I/usr/include/libsvm/" dh_auto_configure -- --with-cluster --without-python --with-python3 --without-forester --without-doc --without-tutorial + if [ -r man/help2manWrapper.sh ]; then chmod +x man/help2manWrapper.sh; fi override_dh_auto_build: if [ ! -d src/cthreadpool ]; then \ View it on GitLab: https://salsa.debian.org/med-team/vienna-rna/-/commit/af6e7fb08034c5a49904c95625e0302dc9c08842 -- View it on GitLab: https://salsa.debian.org/med-team/vienna-rna/-/commit/af6e7fb08034c5a49904c95625e0302dc9c08842 You're receiving this email because of your account on salsa.debian.org.
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