Nilesh Patra pushed to branch master at Debian Med / radiant
Commits: 79173805 by Nilesh Patra at 2020-11-02T14:19:29+05:30 Remove data and extra binary - use multi-orig tarball instead - - - - - 22f513aa by Nilesh Patra at 2020-11-02T14:20:03+05:30 New upstream version 2.7.1+dfsg - - - - - 47642433 by Nilesh Patra at 2020-11-02T14:21:16+05:30 Update upstream source from tag 'upstream/2.7.1+dfsg' Update to upstream version '2.7.1+dfsg' with Debian dir ea62367240ae3b10ac0d2bc2f503d9c56ecb9e9c - - - - - 6e1da98d by Nilesh Patra at 2020-11-02T14:32:16+05:30 Fix tests - - - - - 823c9585 by Nilesh Patra at 2020-11-02T14:32:31+05:30 Update changelog - - - - - 10 changed files: - debian/tests/README → debian-tests-data/README - debian/tests/data/ktImportTextTest.txt → debian-tests-data/ktImportTextTest.txt - debian/tests/data/ktImportXMLTest.xml → debian-tests-data/ktImportXMLTest.xml - debian/tests/data/rdp_sample.fa → debian-tests-data/rdp_sample.fa - debian/tests/data/taxonomy/taxonomy.tab → debian-tests-data/taxonomy/taxonomy.tab - debian/changelog - debian/control - + debian/gbp.conf - − debian/radiant-examples.docs - debian/tests/run-unit-test Changes: ===================================== debian/tests/README → debian-tests-data/README ===================================== ===================================== debian/tests/data/ktImportTextTest.txt → debian-tests-data/ktImportTextTest.txt ===================================== ===================================== debian/tests/data/ktImportXMLTest.xml → debian-tests-data/ktImportXMLTest.xml ===================================== ===================================== debian/tests/data/rdp_sample.fa → debian-tests-data/rdp_sample.fa ===================================== ===================================== debian/tests/data/taxonomy/taxonomy.tab → debian-tests-data/taxonomy/taxonomy.tab ===================================== ===================================== debian/changelog ===================================== @@ -5,7 +5,6 @@ radiant (2.7.1+dfsg-2) unstable; urgency=medium * d/u/metadata: yamllint [ Nilesh Patra ] - * Add binary: radiant-examples * Add autopkgtests * Install relevant examples * Update description @@ -15,6 +14,7 @@ radiant (2.7.1+dfsg-2) unstable; urgency=medium * Add "Rules-Requires-Root:no" * Update upstream/metadata * compat version: 13 + * Add multi-orig tarball for testing data -- Nilesh Patra <[email protected]> Fri, 21 Aug 2020 08:06:28 +0000 ===================================== debian/control ===================================== @@ -19,16 +19,3 @@ Description: explore hierarchical metagenomic data with zoomable pie charts Krona charts include support for several bioinformatics tools and raw data formats. The charts can be viewed with a recent version of any major web browser. - -Package: radiant-examples -Architecture: all -Depends: ${misc:Depends} -Enhances: radiant -Description: Examples for radiant: explore hierarchical metagenomic data - Krona allows hierarchical data to be explored with zoomable pie charts. - Krona charts include support for several bioinformatics tools and raw - data formats. The charts can be viewed with a recent version of any - major web browser. - . - This package contains a test data set as well as sample scripts - running some test suite provided by Debian also as autopkgtest. ===================================== debian/gbp.conf ===================================== @@ -0,0 +1,4 @@ +[DEFAULT] +pristine-tar=True +filter=[ '.gitignore', '.travis.yml', '.git*' ] +component=['debian-tests-data'] ===================================== debian/radiant-examples.docs deleted ===================================== @@ -1,2 +0,0 @@ -debian/tests/data/* -KronaTools/data/ec.tsv ===================================== debian/tests/run-unit-test ===================================== @@ -2,13 +2,15 @@ set -e pkg=radiant +CUR_DIR=`pwd` if [ "${AUTOPKGTEST_TMP}" = "" ] ; then AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM fi -cp /usr/share/doc/${pkg}-examples/* -a "${AUTOPKGTEST_TMP}" +cp ${CUR_DIR}/debian-tests-data/* -a "${AUTOPKGTEST_TMP}" +cp ${CUR_DIR}/KronaTools/data/ec.tsv "${AUTOPKGTEST_TMP}" cd "${AUTOPKGTEST_TMP}" gunzip -r * View it on GitLab: https://salsa.debian.org/med-team/radiant/-/compare/f96f385941a3f1cce4d161d142203df198fb32dc...823c9585b0360e581b535177d01a2ff9dd8746bb -- View it on GitLab: https://salsa.debian.org/med-team/radiant/-/compare/f96f385941a3f1cce4d161d142203df198fb32dc...823c9585b0360e581b535177d01a2ff9dd8746bb You're receiving this email because of your account on salsa.debian.org.
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