Nilesh Patra pushed to branch master at Debian Med / xpore
Commits: 38c76cba by Nilesh Patra at 2021-05-21T16:37:03+00:00 The package is an application hence change binary package names accordingly - - - - - 4321bf7c by Nilesh Patra at 2021-05-21T16:42:31+00:00 Install required files in the application binary - - - - - 5960e471 by Nilesh Patra at 2021-05-21T22:40:47+05:30 Install docs at proper location - - - - - 541c37ad by Nilesh Patra at 2021-05-21T22:41:20+05:30 Change section of -doc package to doc - - - - - 4079395d by Nilesh Patra at 2021-05-21T22:41:43+05:30 Add d/xpore-doc.doc-base - - - - - e314c1a4 by Nilesh Patra at 2021-05-21T22:42:18+05:30 Add upstream/metadata - - - - - 766a3781 by Nilesh Patra at 2021-05-21T22:49:17+05:30 Mention Steffen's full name - - - - - 8 changed files: - debian/control - debian/copyright - − debian/python-xpore-doc.docs - debian/rules - + debian/upstream/metadata - + debian/xpore-doc.doc-base - + debian/xpore-doc.install - + debian/xpore.install Changes: ===================================== debian/control ===================================== @@ -10,10 +10,10 @@ Vcs-Git: https://salsa.debian.org/med-team/xpore.git #Testsuite: autopkgtest-pkg-python Rules-Requires-Root: no -Package: python3-xpore +Package: xpore Architecture: all Depends: ${python3:Depends}, ${misc:Depends} -Suggests: python-xpore-doc +Suggests: xpore-doc Description: Nanopore analysis of differential RNA modifications RNA is transcribed from DNA, possibly spliced and exported to the cytoplasm - fine - but its bases can also be modified, edited, and @@ -26,9 +26,10 @@ Description: Nanopore analysis of differential RNA modifications to a difference. And maybe one can even statistically associate such differences with a molecular or clinical phenotype. -Package: python-xpore-doc +Package: xpore-doc +Section: doc Architecture: all Depends: ${sphinxdoc:Depends}, ${misc:Depends} Suggests: python-xpore-doc -Description: documentation for the ppmd Python library +Description: documentation for the xpore Python package This package provides documentation for xpore ===================================== debian/copyright ===================================== @@ -4,12 +4,12 @@ Upstream-Contact: Ploy N. Pratanwanich <[email protected]> Source: https://github.com/GoekeLab/xpore Files: * -Copyright: Ploy N. Pratanwanich <[email protected]> +Copyright: Ploy N. Pratanwanich <[email protected]> 2020 Göke Lab License: Expat Files: debian/* -Copyright: 2021 steffen <[email protected]> +Copyright: 2021 Steffen Moeller <[email protected]> License: Expat License: Expat ===================================== debian/python-xpore-doc.docs deleted ===================================== @@ -1 +0,0 @@ -.pybuild/docs/* ===================================== debian/rules ===================================== @@ -3,8 +3,6 @@ # output every command that modifies files on the build system. #export DH_VERBOSE = 1 -export PYBUILD_NAME=xpore - %: dh $@ --with python3,sphinxdoc --buildsystem=pybuild @@ -12,8 +10,10 @@ export PYBUILD_NAME=xpore override_dh_auto_build: dh_auto_build ifeq (,$(filter nodoc,$(DEB_BUILD_OPTIONS))) - cd docs/source && \ PYTHONPATH=$(CURDIR) http_proxy='http://127.0.0.1:9/' https_proxy='https://127.0.0.1:9/' \ - sphinx-build -N -E -T -b html . $(CURDIR)/.pybuild/docs/html/ - rm -rf $(CURDIR)/.pybuild/docs/html/.doctrees + sphinx-build -N -E -T -b html docs/source build/html/ + rm -rf build/html/.doctrees build/html/.nojekyll endif + +#execute_after_dh_install: +# mv debian/python3-xpore debian/xpore ===================================== debian/upstream/metadata ===================================== @@ -0,0 +1,7 @@ +--- +Archive: GitHub +Bug-Database: https://github.com/GoekeLab/xpore/issues +Bug-Submit: https://github.com/GoekeLab/xpore/issues/new +Changelog: https://github.com/GoekeLab/xpore/tags +Repository: https://github.com/GoekeLab/xpore.git +Repository-Browse: https://github.com/GoekeLab/xpore ===================================== debian/xpore-doc.doc-base ===================================== @@ -0,0 +1,9 @@ +Document: xpore +Title: Documentation for xpore +Author: Goke Lab +Abstract: xpore is a Python package for detection of differentail RNA modifications from Nanopore sequencing data +Section: Science/Biology + +Format: HTML +Index: /usr/share/doc/xpore-doc/html/index.html +Files: /usr/share/doc/xpore-doc/html/*.html ===================================== debian/xpore-doc.install ===================================== @@ -0,0 +1 @@ +build/html/ usr/share/doc/xpore-doc/ ===================================== debian/xpore.install ===================================== @@ -0,0 +1,2 @@ +usr/bin/ +usr/lib/python*/ View it on GitLab: https://salsa.debian.org/med-team/xpore/-/compare/81ae2df7519ebe5b67b03b2d6d9ea1c5e759082d...766a3781d2b7117b8b14341e9009dbac54307910 -- View it on GitLab: https://salsa.debian.org/med-team/xpore/-/compare/81ae2df7519ebe5b67b03b2d6d9ea1c5e759082d...766a3781d2b7117b8b14341e9009dbac54307910 You're receiving this email because of your account on salsa.debian.org.
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