Hi Charles, I've just uploaded IGV 2.0.6-1.
What do I do with the pristine-tar and meta branches? These branches are new to me. Cheers, Shaun On 28 June 2011 10:38, Shaun Jackman <[email protected]> wrote: > Hi Charles, > > I'm going to be pretty busy for about two weeks. I probably won't have > time to look into this until then. If 1.5.65 compiles cleanly and > works, there's no harm in uploading that in the mean time. I can take > a look into the 2.0 log4j issue two weeks from now. The > RollingFileAppender class is at least present in the jar: > > $ strings /usr/share/java/log4j-1.2-1.2.15.jar |grep > /RollingFileAppender.class$ > org/apache/log4j/RollingFileAppender.class > > Cheers, > Shaun > > On 27 June 2011 23:17, Charles Plessy <[email protected]> wrote: >> Dear Shaun and everybody, >> >> There is a major update of the IGV, which may be interesting to follow. >> Unfortunately, I have tried to build it from source but could not produce a >> JAR >> file that can be executed. I have been reluctant to modify the master branch >> of the Git repository where we manage the igv package, as there is a version >> 1.5.65 on the upstream download area, but not in their changelog, which >> suggests that there may be some maintainance. >> >> What shall I do: share work on version 2.0 in our master branch, make a >> separate branch for the moment, or provide a temporary fork separately ? >> >> For the record, the error I get is: >> >> log4j:ERROR Could not find value for key log4j.appender.R >> log4j:ERROR Could not instantiate appender named "R". >> ERROR [2011-06-28 15:16:26,637] [DefaultExceptionHandler.java:42] [main] >> Unhandled exception >> java.lang.NoClassDefFoundError: org/apache/log4j/RollingFileAppender >> at org.broad.igv.ui.Main.initializeLog(Main.java:225) >> at org.broad.igv.ui.Main.initApplication(Main.java:94) >> at org.broad.igv.ui.Main.main(Main.java:70) >> Caused by: java.lang.ClassNotFoundException: >> org.apache.log4j.RollingFileAppender >> at java.net.URLClassLoader$1.run(URLClassLoader.java:217) >> at java.security.AccessController.doPrivileged(Native Method) >> at java.net.URLClassLoader.findClass(URLClassLoader.java:205) >> at java.lang.ClassLoader.loadClass(ClassLoader.java:321) >> at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294) >> at java.lang.ClassLoader.loadClass(ClassLoader.java:266) >> at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:334) >> ... 3 more >> >> >> Have a nice day, > -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/CADX6M3rG7Mb0-qErugTjCZgqTd1H4u4BmSzKLWPFP3WYFO9D=q...@mail.gmail.com
