Hi, Dylan, على السبت 26 آذار 2016 11:55، كتب Dylan: > Hi all, > Could someone sponsor this new package [1] ? >
Done. > Package name: beagle > URL: https://faculty.washington.edu/browning/beagle/beagle.html > License: GPL3+ > Programming Lang: Java > Description: Genotypic imputation that works on phased genotypes. > Beagle performs genotype calling, genotype phasing, imputation of > ungenotyped markers, and identity-by-descent segment detection. > Genotypic imputation works on phased haplotypes using a Li and > Stephens haplotype frequency model. Beagle also implements the Refined > IBD algorithm for detecting homozygosity-by-descent (HBD) and > identity-by-descent (IBD) segments. > This looks great to me. There may be an issue with the pdf manual not being built from source (although the source is probably a docx file), but we'll see what the archive masters say. Thanks and regards Afif -- Afif Elghraoui | عفيف الغراوي http://afif.ghraoui.name