Hello, على الإثنين 27 حزيران 2016 12:04، كتب Michael Crusoe: > Python packages that need packaging: > > bx-python [...]
I had started some packaging work on bx-python as a dependency for pbtranscript, but that seems not to be a dependency anymore, so I didn't pursue it. In any case, bx-python development looks to me to have stopped. I didn't find upstream very responsive either [1] (based on a communication attempt and lack of activity on bitbucket). I started some packaging, but it will need some hacking to work. I can push what I have if anyone is interested in it. > > This should a complete list, Nate promises that there are no hidden sub > dependencies. > > They also use a custom fork of pysam What's the plan for this? Integrate the patches upstream or packaging the fork? regards Afif 1. https://bitbucket.org/james_taylor/bx-python/issues/59/tagged-releases-corresponding-to-those-on -- Afif Elghraoui | عفيف الغراوي http://afif.ghraoui.name