Hi Fabian, thanks for the patches!
> So I finally got round to submit my patches for MUMmer. One can be found > in the repo, half of the other is attached to this mail. Unfortunately, > the other half got lost in a code reindentation. Applying the changes > requires refactoring src/tigr/sw_align.cc for the changes in the header. Not really sure I understand what you mean... the patches in the repo's series all apply without a problem and the one attached to your mail doesn't seem to do a lot. Are you sure it is complete? Or where is the other half one would be required to refactor? > If someone has a lot of spare time on the weekend, feel free to go ahead. Not that much spare time but I'd like to understand what I would be up for ;) Also, are the patches Debian-specific? Given that they don't seem to be fixes but rather improve performance, I could imagine Stefan Kurtz (MUMmer upstream) would probably appreciate receiving these patches as well. Thanks Sascha -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.
