Status update. On Mon, Aug 22, 2016 at 05:42:26PM +0200, Michael Crusoe wrote: > One more: snpeff http://snpeff.sourceforge.net/download.html
I'm interested but will not be able to do anything about this before my vacation. Everybody who intends to start is perfectly welcome. > > I'm at the H3Abionet Cloud computing hackathon this week in Pretoria, > > South Africa. > > > > http://www.h3abionet.org/training-and-education/h3abionet-courses/17- > > h3abionet-courses/h3abionet-courses-upcoming/266- > > h3abionet-cloud-computing-hackathon > > > > The resulting CWL tools and workflow descriptions will be contributed in > > real time to the community repository: https://github. > > com/common-workflow-language/workflows > > > > It would be super nice if I could get assistance making Debian packages of > > the following so we don't abuse Docker as a package manager :-) > > > > metagenomeSeq https://bioconductor.org/packages/release/bioc/html/ > > metagenomeSeq.html In new since 3 weeks - so might be available soon. > > phloseq https://github.com/joey711/phyloseq In new since some hours - so will be available at some point in time. > > bamstats http://bamstats.sourceforge.net/ Another Java beast with included JARs. In contrast to snpeff its not on my personal agenda so I'm not sure whether I can help here. I guess it does not make a lot of work once it is packaged since there are no recent changes visible in this project. Kind regards Andreas. -- http://fam-tille.de
