Wonderful, thanks Andreas! Nicola On Tue, Sep 13, 2016 at 9:44 AM Andreas Tille <andr...@an3as.eu> wrote:
> Hi, > > I'd like to give some status update about MetaPhLan2 packaging. > Regarding the large data set I was following the advise given on the > debian-devel mailing list to distribute the fastq flavour of the data > inside the Debian package and run bowtie2 on the users machine either at > package installation time or later at the user opinion by providing a > script which does the conversion. The script compares md5sums of the > original data with the conversion result so this method should be save > and does not stress bandwidth and Debian mirror space to much. > > The metaphlan2-data package is maintained in the Debian Med packaging > Git[1] and was uploaded to the new queue 2 days ago. It will hopefully > accepted by Debian ftpmasters in the next couple of days. > > Once the metaphlan2-data package is accepted I'll upload the actual code > as package metaphlan2 (Depending from metaphlan2-data). It is > maintained in the Debian Med packaging Git as well[2]. I'll keep you > updated once metaphlan2 will be avialable from the Debian mirrors. > > Kind regards and thanks for your support > > Andreas. > > [1] https://anonscm.debian.org/cgit/debian-med/metaphlan2-data.git > [2] https://anonscm.debian.org/cgit/debian-med/metaphlan2.git > > On Fri, Aug 19, 2016 at 07:17:25AM +0000, Duy Tin Truong wrote: > > Hi Andreas, > > > > Thanks for your explanation. We have officially updated metaphlan2 to > > version 2.6.0 as shown in tags. > > So, when it is convenient for you, please help to add the package of this > > new version. > > > > Many thanks, > > Tin > > > > On Fri, Aug 12, 2016 at 6:31 PM Andreas Tille <ti...@debian.org> wrote: > > > > > Hi Tin, > > > > > > So *if* you want to let users use the latest state of the repository > why > > > don't you do a new versioned release to make it official. Debian uses > a > > > system to check web pages for versioned releases. We can not sneak > into > > > each repository nor wild guessing if it is a stable commit or not. Is > > > there any reason not to release say version 2.6 or 2.5.1 or whatever? > > > > > > Kind regards > > > > > > Andreas. > > > > > > > > [1] https://bitbucket.org/nsegata/hclust2 > > -- > http://fam-tille.de >
