Package: wnpp Severity: wishlist Owner: Debian Med <debian-med@lists.debian.org>
* Package name : porechop Version : 0.2.3 Upstream Author : Ryan R. Wick <rrw...@gmail.com> * URL : https://github.com/rrwick/Porechop * License : GPL3 Programming Lang: C++ Description : adapter trimmer for Oxford Nanopore reads Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit. More information and download links are on the Porechope repo: https://github.com/rrwick/Porechop The package is relevant to the field of genome assembly and will be maintained by the Debian Med team.