Hi Olivier, I've thought I'm so close to get at least discosnp[1] linked against gatb-core but there is a final thing missing:
... cd /build/discosnp-2.3.0/obj-x86_64-linux-gnu/tools/kissnp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/kissnp2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/discosnp-2.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -rdynamic CMakeFiles/kissnp2.dir/src/Bubble.cpp.o CMakeFiles/kissnp2.dir/src/Filter.cpp.o CMakeFiles/kissnp2.dir/src/Kissnp2.cpp.o CMakeFiles/kissnp2.dir/src/main.cpp.o -o ../../bin/kissnp2 -lgatbcore -lhdf5 /usr/bin/ld: cannot find -lhdf5 collect2: error: ld returned 1 exit status My attempt[2] to sneak in some -L/usr/lib/x86_64-linux-gnu/hdf5/serial/ which is obviously missing (if I add it to the '/usr/bin/c++ ' line it works) just failed. Any last tiny hint to get this done? Kind regards Andreas. [1] https://salsa.debian.org/med-team/discosnp [2] https://salsa.debian.org/med-team/discosnp/commit/6b87aec1e8d587e750fd1dd25d419269fc66ed7c -- http://fam-tille.de