Your message dated Fri, 22 Jul 2022 19:10:10 +0000
with message-id <e1oey2m-000cwo...@fasolo.debian.org>
and subject line Bug#1014344: fixed in gatk-bwamem 1.0.4+dfsg2-1
has caused the Debian Bug report #1014344,
regarding ITP: gatk-bwamem -- interface to call Heng Li's bwa mem aligner from
Java code
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
1014344: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1014344
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Debian-med team <debian-med@lists.debian.org>
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org
* Package name : gatk-bwamem
Version : 1.0.4
Upstream Author : Broad Institute
* URL : https://github.com/broadinstitute/gatk-bwamem-jni/
* License : BSD-3-Clause
Programming Lang: Java
Description : interface to call Heng Li's bwa mem aligner from Java code
BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent
sequences against a large reference genome, such as the human genome. It is
written in C.
gatk-bwamem provides a Java library and a shared library to allow one to use
BWA from Java code.
--- End Message ---
--- Begin Message ---
Source: gatk-bwamem
Source-Version: 1.0.4+dfsg2-1
Done: Pierre Gruet <p...@debian.org>
We believe that the bug you reported is fixed in the latest version of
gatk-bwamem, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1014...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <p...@debian.org> (supplier of updated gatk-bwamem package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 06 Jul 2022 12:28:41 +0200
Source: gatk-bwamem
Binary: libgatk-bwamem-java libgatk-bwamem-jni libgatk-bwamem-jni-dbgsym
Architecture: source all amd64
Version: 1.0.4+dfsg2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Pierre Gruet <p...@debian.org>
Description:
libgatk-bwamem-java - interface to call Heng Li's bwa mem aligner from Java
code
libgatk-bwamem-jni - interface to call Heng Li's bwa mem aligner from Java
code (jni)
Closes: 1014344
Changes:
gatk-bwamem (1.0.4+dfsg2-1) unstable; urgency=medium
.
* Initial release (Closes: #1014344)
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gatk-bwamem_1.0.4+dfsg2-1.debian.tar.xz
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