Your message dated Sat, 07 Nov 2020 11:48:55 +0000
with message-id <[email protected]>
and subject line Bug#941846: fixed in h5py 3.1.0-1exp1
has caused the Debian Bug report #941846,
regarding python-h5py: fix upstream MPI tests
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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941846: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=941846
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: python-h5py
Version: 2.10.0-1
Severity: normal
Control: forwarded -1 https://github.com/h5py/h5py/issues/1364
Upstream tests currently break when run with mpirun.
debian/tests/test_file_mpi.py has been created as a workaround to run
mpio tests manually.
Problem is logged upstream in Issue#1364.
Upstream is working on it, see PR#1255,
https://github.com/h5py/h5py/pull/1255
-- System Information:
Debian Release: bullseye/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 5.2.0-2-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8),
LANGUAGE=en_AU:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages python-h5py depends on:
ii libc6 2.29-2
ii libhdf5-openmpi-103 1.10.4+repack-10
ii python 2.7.16-1
ii python-mpi4py 3.0.2-13
ii python-numpy [python-numpy-abi9] 1:1.16.5-1
ii python-six 1.12.0-2
python-h5py recommends no packages.
Versions of packages python-h5py suggests:
ii python-h5py-doc 2.10.0-1
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: h5py
Source-Version: 3.1.0-1exp1
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
h5py, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated h5py package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 07 Nov 2020 19:31:43 +0800
Source: h5py
Architecture: source
Version: 3.1.0-1exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 941846
Changes:
h5py (3.1.0-1exp1) experimental; urgency=medium
.
* Team upload.
* New upstream release.
* upstream tests now test MPI support via pytest-mpi (--with-mpi)
Closes: #941846.
* use H5PY_SYSTEM_LZF=1 to build against system lzf.
debian patch use_system_lzf.patch still needed to provide path to
lzf include dir.
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