Your message dated Fri, 28 Feb 2025 12:32:14 +0000
with message-id <[email protected]>
and subject line Bug#1072655: fixed in silx 2.2.0+dfsg-2
has caused the Debian Bug report #1072655,
regarding silx: no-opencl tests fail with pytest8.2
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1072655: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1072655
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: silx
Version: 2.0.1+dfsg-3
Severity: normal
Tags: patch
X-Debbugs-Cc: [email protected]
User: [email protected]
Usertags: origin-ubuntu oracular ubuntu-patch
Dear maintainer,
silx's autopkgtests (the no-opencl tests in partiuclar) fail with pytest 8.2
due to a known issue upstream [1]. It hasn't been committed upstream,
but there is an open PR to fix the issue [2]. I cherry-picked the fix
and applied it in Ubuntu to resolve the issue.
* d/p/0010-SpecFile-deallocation-issue.patch: Fix an issue with pytest
runner segfaulting with Pytest 8.2+ (LP: 2068521).
Thanks for considering the patch.
[1] https://github.com/silx-kit/silx/issues/4128
[2] https://github.com/silx-kit/silx/pull/4129/
-- System Information:
Debian Release: trixie/sid
APT prefers oracular
APT policy: (500, 'oracular'), (100, 'oracular-proposed')
Architecture: amd64 (x86_64)
Kernel: Linux 6.8.0-31-generic (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
diff -Nru silx-2.0.1+dfsg/debian/patches/0010-SpecFile-deallocation-issue.patch
silx-2.0.1+dfsg/debian/patches/0010-SpecFile-deallocation-issue.patch
--- silx-2.0.1+dfsg/debian/patches/0010-SpecFile-deallocation-issue.patch
1969-12-31 16:00:00.000000000 -0800
+++ silx-2.0.1+dfsg/debian/patches/0010-SpecFile-deallocation-issue.patch
2024-06-05 12:21:03.000000000 -0700
@@ -0,0 +1,24 @@
+Description: Fixes autopkgtests with pytest 8.2+
+ The clean up for tests in src/silx/io/test/test_specfilewrapper.py was
+ causing the pytest runner to segfault in pytest 8.2, causing the autopkgtests
+ to fail.
+Author: Chris Peterson <[email protected]>
+Origin: upstream, https://github.com/silx-kit/silx/pull/4129/
+Bug: https://github.com/silx-kit/silx/issues/4128
+Bug-Ubuntu: https://bugs.launchpad.net/ubuntu/+source/silx/+bug/2068521
+Last-Update: 2024-06-05
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- a/src/silx/io/specfile.pyx
++++ b/src/silx/io/specfile.pyx
+@@ -658,8 +658,8 @@
+ else:
+ self.filename = filename
+
+- def __dealloc__(self):
+- """Destructor: Calls SfClose(self.handle)"""
++ def __del__(self):
++ """Finalizer: Calls SfClose(self.handle)"""
+ self.close()
+
+ def close(self):
diff -Nru silx-2.0.1+dfsg/debian/patches/series
silx-2.0.1+dfsg/debian/patches/series
--- silx-2.0.1+dfsg/debian/patches/series 2024-04-16 01:47:09.000000000
-0700
+++ silx-2.0.1+dfsg/debian/patches/series 2024-06-05 12:05:23.000000000
-0700
@@ -2,3 +2,4 @@
0007-python3.10-fix.patch
0009-Skip-testing-nanmin-on-float64-arrays-on-mips-el.patch
0008-deal-with-h5py-until-we-solved-1051781.patch
+0010-SpecFile-deallocation-issue.patch
--- End Message ---
--- Begin Message ---
Source: silx
Source-Version: 2.2.0+dfsg-2
Done: Picca Frédéric-Emmanuel <[email protected]>
We believe that the bug you reported is fixed in the latest version of
silx, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Picca Frédéric-Emmanuel <[email protected]> (supplier of updated silx package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 28 Feb 2025 12:53:34 +0100
Source: silx
Architecture: source
Version: 2.2.0+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Picca Frédéric-Emmanuel <[email protected]>
Closes: 1013114 1047562 1072655 1099038
Changes:
silx (2.2.0+dfsg-2) unstable; urgency=medium
.
[ Alexandre Detiste ]
* remove noise from patch
.
[ Picca Frédéric-Emmanuel ]
* Bug fix: "Permission denied:
'/usr/lib/python3/dist-packages/silx/pytest-cache-files-0lxt05lh'",
thanks to Picca Frédéric-Emmanuel (Closes: #1099038).
* Bug fix: "no-opencl tests fail with pytest8.2", thanks to Chris
Peterson (Closes: #1072655).
* Bug fix: "TestRetry fails with scipy 1.8.1-4", thanks to Drew Parsons
(Closes: #1013114).
* Bug fix: "Fails to build source after successful build", thanks to
Lucas Nussbaum (Closes: #1047562).
Checksums-Sha1:
724d7f250e12f7af37d8ac52e8a20c47d6a25e55 3284 silx_2.2.0+dfsg-2.dsc
c79e795ab01a3c4fd9b08d6f4c865d0515529da8 157628 silx_2.2.0+dfsg-2.debian.tar.xz
Checksums-Sha256:
343095f19fb663c3272838af4c25152614e75dce57d80d4029c50fb8baaf7ac6 3284
silx_2.2.0+dfsg-2.dsc
7d7c3600295019337dfca9c19be0baf129bcf6d8eb9f0b8dc10bc63bde9a52fc 157628
silx_2.2.0+dfsg-2.debian.tar.xz
Files:
25f7444face80b2afa6083900a51f437 3284 science optional silx_2.2.0+dfsg-2.dsc
b5298dfa076badad5c5ea001759670aa 157628 science optional
silx_2.2.0+dfsg-2.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=JJuH
-----END PGP SIGNATURE-----
pgpOtp3xUn4bA.pgp
Description: PGP signature
--- End Message ---
--
debian-science-maintainers mailing list
[email protected]
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
