Your message dated Tue, 17 Feb 2015 11:35:32 +0000
with message-id <e1yngra-0004yo...@franck.debian.org>
and subject line Bug#777065: fixed in yade 1.12.0-3~exp1
has caused the Debian Bug report #777065,
regarding yade FTBFS on mips/mipsel: out of memory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
777065: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=777065
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: yade
Version: 1.12.0-2
Tags: sid patch
Severity: normal
Justification: FTBFS
User: debian-m...@lists.debian.org
Usertags: mips-patch
Package yade version 1.12.0-2 FTBFS for mips/mipsel arch
with an error:
> /usr/bin/c++ -DYADE_ODEINT -DYADE_VTK6 -Dyade_EXPORTS -g -O2
> -fstack-protector-strong -Wformat -Werror=format-security --param
> ggc-min-expand=20 --param ggc-min-heapsize=128000 -D_FORTIFY_SOURCE=2
> -ftrack-macro-expansion=0 -save-temps -std=c++0x -fPIC -DYADE_VTK
> -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL
> -frounding-math -DYADE_CGAL -DFLOW_ENGINE -DYADE_GL2PS -DLBM_ENGINE -O3
> -DNDEBUG -fPIC -I/«PKGBUILDDIR»
> -I/usr/lib/python2.7/dist-packages/numpy/core/include
> -I/usr/include/python2.7 -I/usr/include/eigen3 -I/usr/include/vtk-6.1
> -I/usr/include/mipsel-linux-gnu -I/usr/include/jsoncpp
> -I/usr/include/glib-2.0 -I/usr/lib/mipsel-linux-gnu/glib-2.0/include
> -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative
> -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus
> -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtSql -I/usr/include/qt4/QtOpenGL
> -I/usr/include/qt4/QtNetwork -I/usr/include/qt4/QtXmlPatterns
> -I/usr/include/qt4/QtWebKit -I/usr/include/qt4/QtHelp
> -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtTest
> -I/usr/include/qt4/QtScript -I/usr/include/qt4/QtSvg
> -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui
> -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default -I/usr/include/qt4
> -I/«PKGBUILDDIR»/debian/build -I/«PKGBUILDDIR»/debian/build/pkg/pfv
> -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN
> -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -o
> CMakeFiles/yade.dir/pkg/dem/Shop_02.cpp.o -c
> /«PKGBUILDDIR»/pkg/dem/Shop_02.cpp
>
> cc1plus: out of memory allocating 4035988 bytes after a total of 29720576
> bytes
> make[3]: *** [CMakeFiles/yade.dir/pkg/dem/Shop_02.cpp.o] Error 1
> make[2]: *** [CMakeFiles/yade.dir/all] Error 2
I tried to reduce ggc-min-expand to 10,
and with this change package compiles for me.
For mipsel on xlp builds finished successfully.
For mips and mipsel on cavium
build failed with TERM signal on 'usr/bin/yade --check' command.
If run this check manually it finishes successfully,
but need a lot of time for execution.
With attached patch I was able to build yade
successfully for both mips and mipsel.
Patch contains changes that reduce ggc-min-expand
and disable 'usr/bin/yade --check' for mips/mipsel.
Could you please consider including these changes?
Best Regards,
Dejan
diff -uNr yade-1.12.0.orig/debian/rules yade-1.12.0/debian/rules
--- yade-1.12.0.orig/debian/rules 2014-10-24 16:07:21.000000000 +0000
+++ yade-1.12.0/debian/rules 2015-01-29 18:20:00.000000000 +0000
@@ -9,10 +9,14 @@
export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed,-no-keep-memory
# Theses flags are neccessry for weak archs. See #733152
-ifneq (,$(filter $(DEB_HOST_ARCH), armel armhf hurd-i386 mips mipsel i386 kfreebsd-i386))
+ifneq (,$(filter $(DEB_HOST_ARCH), armel armhf hurd-i386 i386 kfreebsd-i386))
export DEB_CXXFLAGS_MAINT_APPEND = --param ggc-min-expand=20 --param ggc-min-heapsize=128000
endif
+ifneq (,$(filter $(DEB_HOST_ARCH), mips mipsel))
+ export DEB_CXXFLAGS_MAINT_APPEND = --param ggc-min-expand=10 --param ggc-min-heapsize=128000
+endif
+
# Check, whether Build-Depends-Indep are installed
BUILD_DOC=$(shell dpkg -s python-sphinx | grep -q "^Status:.* installed$$" && echo yes)
@@ -42,7 +46,9 @@
help2man $(tmpInstall)/usr/bin/yade > yade.1
help2man $(tmpInstall)/usr/bin/yade-batch > yade-batch.1
$(tmpInstall)/usr/bin/yade --test
+ifeq (,$(filter $(DEB_HOST_ARCH), mips mipsel))
$(tmpInstall)/usr/bin/yade --check
+endif
dh_numpy
ifeq ($(BUILD_DOC), yes)
#Generate docs
--- End Message ---
--- Begin Message ---
Source: yade
Source-Version: 1.12.0-3~exp1
We believe that the bug you reported is fixed in the latest version of
yade, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 777...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Anton Gladky <gl...@debian.org> (supplier of updated yade package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 17 Feb 2015 00:05:40 +0100
Source: yade
Binary: yade libyade python-yade yade-doc
Architecture: source all
Version: 1.12.0-3~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Anton Gladky <gl...@debian.org>
Description:
libyade - Platform for discrete element modeling. Libraries
python-yade - Platform for discrete element modeling. Python bindings
yade - Platform for discrete element modeling
yade-doc - Platform for discrete element modeling. Documentation
Closes: 777065 778190
Changes:
yade (1.12.0-3~exp1) experimental; urgency=medium
.
[ Anton Gladky ]
* [5ac2a25] Let yade be built only on specific archs.
.
[ Dejan Latinovic ]
* [ac47ddb] Enable yade on on mips/mipsel. (Closes: #777065)
.
[ Anton Gladky ]
* [fef7397] Fix compilation with GCC-5. (Closes: #778190).
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Files:
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291460cad43e3778fe276a9de6704e94 19336 science extra
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--- End Message ---
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