Your message dated Tue, 06 Dec 2016 01:48:39 +0000
with message-id <e1ce4s3-0009ai...@fasolo.debian.org>
and subject line Bug#838327: fixed in dune-pdelab 2.5.0~20161204gdb53a76-1
has caused the Debian Bug report #838327,
regarding dune-pdelab: FTBFS in testing (error: cannot convert 'mem_usage_t*'
to 'GlobalLU_t*')
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
838327: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=838327
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:dune-pdelab
Version: 2.4.1-1
Severity: serious
Dear maintainer:
I tried to build this package in stretch with "dpkg-buildpackage -A"
(which is what the "Arch: all" autobuilder would do to build it)
but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules build-indep
dh build-indep --parallel
dh_testdir -i -O--parallel
dh_update_autotools_config -i -O--parallel
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/dunecontrol autogen
WARNING: could not find module dune-alugrid,
module is also unknown to pkg-config.
Maybe you need to adjust PKG_CONFIG_PATH!
dune-alugrid is suggested by dune-pdelab
Skipping dune-alugrid!
--- going to build dune-pdelab ---
[... snipped ...]
libtool: link: g++ -std=c++11 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -Wformat -Werror=format-security -fpermissive -pthread
-pthread -Wl,-z -Wl,relro -o .libs/testgridfunctionspace
testgridfunctionspace.o -pthread -Wl,-rpath -Wl,/usr/lib/openmpi/lib
-Wl,--enable-new-dtags ../../../lib/.libs/libdunepdelab.so -ldunegrid
-ldunegeometry -ldunecommon -L/usr/lib/openmpi/lib -lmpi -lugS2 -lugS3 -ldevS
-lm -pthread
g++ -std=c++11 -DHAVE_CONFIG_H -I. -I../../.. -pthread -I./ -I./ -I./ -I./
-I./ -I./ -I./ -I./ -I./ -I./ -I./ -I./ -DENABLE_POSIX_CLOCK -I../../..
-DGRIDSDIR="\"./grids\"" -DENABLE_UG -pthread -I./ -I./ -I./ -I./ -I./
-I./ -I./ -I./ -I./ -I./ -I./ -I./ -DENABLE_POSIX_CLOCK
-I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent
-I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread
-DMPIPP_H -DENABLE_MPI=1 -I/usr/include/superlu -DENABLE_SUPERLU -Wdate-time
-D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -Wformat -Werror=format-security -fpermissive -c -o
testelasticity-testelasticity.o `test -f 'testelasticity.cc' || echo
'./'`testelasticity.cc
In file included from /usr/include/dune/istl/paamg/amg.hh:13:0,
from
../../../dune/pdelab/backend/istl/seqistlsolverbackend.hh:15,
from ../../../dune/pdelab/backend/istl/istlsolverbackend.hh:6,
from ../../../dune/pdelab/backend/istl.hh:7,
from testelasticity.cc:20:
/usr/include/dune/istl/superlu.hh: In static member function 'static void
Dune::SuperLUSolveChooser<double>::solve(superlu_options_t*, SuperMatrix*,
int*, int*, int*, char*, double*, double*, SuperMatrix*, SuperMatrix*, void*,
int, SuperMatrix*, SuperMatrix*, double*, double*, double*, double*,
mem_usage_t*, SuperLUStat_t*, int*)':
/usr/include/dune/istl/superlu.hh:172:34: error: cannot convert 'mem_usage_t*'
to 'GlobalLU_t*' for argument '19' to 'void dgssvx(superlu_options_t*,
SuperMatrix*, int*, int*, int*, char*, double*, double*, SuperMatrix*,
SuperMatrix*, void*, int, SuperMatrix*, SuperMatrix*, double*, double*,
double*, double*, GlobalLU_t*, mem_usage_t*, SuperLUStat_t*, int*)'
memusage, stat, info);
^
Makefile:1646: recipe for target 'testelasticity-testelasticity.o' failed
make[7]: *** [testelasticity-testelasticity.o] Error 1
make[7]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test'
Makefile:2231: recipe for target 'check-am' failed
make[6]: *** [check-am] Error 2
make[6]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test'
Makefile:1808: recipe for target 'check-recursive' failed
make[5]: *** [check-recursive] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab/test'
Makefile:638: recipe for target 'check-recursive' failed
make[4]: *** [check-recursive] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/dune/pdelab'
Makefile:620: recipe for target 'check-recursive' failed
make[3]: *** [check-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/dune'
Makefile:798: recipe for target 'check-recursive' failed
make[2]: *** [check-recursive] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test: make -j1 check VERBOSE=1 returned exit code 2
/usr/share/dune/dune-debian.mk:26: recipe for target 'override_dh_auto_test'
failed
make[1]: *** [override_dh_auto_test] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules:10: recipe for target 'build-indep' failed
make: *** [build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2
--------------------------------------------------------------------------------
Seems a GCC 6 related problem.
Thanks.
--- End Message ---
--- Begin Message ---
Source: dune-pdelab
Source-Version: 2.5.0~20161204gdb53a76-1
We believe that the bug you reported is fixed in the latest version of
dune-pdelab, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 838...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Ansgar Burchardt <ans...@debian.org> (supplier of updated dune-pdelab package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 06 Dec 2016 02:14:16 +0100
Source: dune-pdelab
Binary: libdune-pdelab-dev libdune-pdelab-doc
Architecture: all amd64 source
Version: 2.5.0~20161204gdb53a76-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Ansgar Burchardt <ans...@debian.org>
Closes: 838327
Description:
libdune-pdelab-dev - toolbox for solving PDEs -- discretization module
(development fi
libdune-pdelab-doc - toolbox for solving PDEs -- discretization module
(documentation)
Changes:
dune-pdelab (2.5.0~20161204gdb53a76-1) unstable; urgency=medium
.
* New upstream snapshot.
+ Fixes build failure with newer SuperLU versions. (Closes: #838327)
* Switch to CMake.
Checksums-Sha1:
72150953c00c8420b86d98c80e8bc45e9eeb9ef3 2631
dune-pdelab_2.5.0~20161204gdb53a76-1.dsc
d9f9237cdcb2c511a72288b454b7f13a1783a5fb 417068
dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz
2715f2adbd39c0d2889bfa60661aec32b133608e 4156
dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz
382ef05d828b4518975659375b71627eb6f2ec18 11092
dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo
eb3a5490a1ffe4d1b6bb7979b02bee2b2c92282e 106484
libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb
ae331048c923bf62e50f52d8a6406674b8fb86af 306062
libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb
c43e307d967f37e5ffdddc7de9fe55897b73afe4 18760064
libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb
Checksums-Sha256:
7b36ccea47af00045957c59c4997ceb5559fc6b7acb459318b43610836a2290f 2631
dune-pdelab_2.5.0~20161204gdb53a76-1.dsc
82911e5266d5c13ab7e3b0de1d92878ad8473269ed2bc31afae152272798929d 417068
dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz
c2261127916b1c38518330ea6e70b7319510782616204ddc570e1d622b7749e2 4156
dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz
dcb12f15c8921e97cd0ee3faedb0b147fcab39e561e3f5b25b84bf81adb6cb58 11092
dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo
75f0003d54fd8cc1a9627373cba050bf050206d738cafccba2e43ce53ea19acd 106484
libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb
d774c924085a5907dc103d653025ef542674c711be27d965a8f68995c237d78a 306062
libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb
f5e5a0ec7802798c1f54eaede2a956e6059cb981e1d6499ef1077a347e2e51b2 18760064
libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb
Files:
1530bfbc5b6f53de897606c00fcdae2f 2631 libs optional
dune-pdelab_2.5.0~20161204gdb53a76-1.dsc
8e4c774c11726e8e6af626c5882a2c49 417068 libs optional
dune-pdelab_2.5.0~20161204gdb53a76.orig.tar.xz
a9db46c38091b10134a9c1efd55b4a43 4156 libs optional
dune-pdelab_2.5.0~20161204gdb53a76-1.debian.tar.xz
2399356c6a0b62102619966d8fdbf91d 11092 libs optional
dune-pdelab_2.5.0~20161204gdb53a76-1_amd64.buildinfo
bb8709eda66203fa00f84be5b70e0d87 106484 debug extra
libdune-pdelab-dev-dbgsym_2.5.0~20161204gdb53a76-1_amd64.deb
4619222c0c02dd40bd5c2944ecd2a19f 306062 libdevel optional
libdune-pdelab-dev_2.5.0~20161204gdb53a76-1_amd64.deb
ff073c88af630fd4a7b4809be735d152 18760064 doc optional
libdune-pdelab-doc_2.5.0~20161204gdb53a76-1_all.deb
-----BEGIN PGP SIGNATURE-----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=dE/V
-----END PGP SIGNATURE-----
--- End Message ---
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
