Your message dated Sat, 17 Dec 2016 22:06:28 +0000
with message-id <e1cin7c-000hws...@fasolo.debian.org>
and subject line Bug#842881: fixed in openmpi 2.0.2~git.20161225-8
has caused the Debian Bug report #842881,
regarding libmpich12: extraneous - and possibly wrong - symbolic link:
/usr/lib/libmpich.so.12 -> libmpi.so
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
842881: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=842881
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libmpich12
Version: 3.2-7
Severity: serious
Justification: make other packages FTBFS
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Hi,
I've just experienced a weird FTBFS on hdf5 on my box, caused by an
extraneous symlink:
/usr/lib/libmpich.so.12 -> libmpi.so
Steps to reproduce:
1- Start from an unstable sbuild chroot
2- apt-get install libmpich-dev
3- apt-get install libopenmpi-dev
Result:
/usr/lib/libmpich.so.12 -> libmpi.so
/usr/lib/libmpi.so -> /etc/alternatives/libmpi.so
/etc/alternatives/libmpi.so -> /usr/lib/openmpi/lib/libmpi.so
/usr/lib/openmpi/lib/libmpi.so -> libmpi.so.20.0.1
In other words, /usr/lib/libmpich.so.12 is a symlink to
/usr/lib/openmpi/lib/libmpi.so.20.0.1 from libopenmpi2.
This link is created by ldconfig if and only if /usr/lib/libmpi.so
exists:
1- Start again from an unstable sbuild chroot
2- apt-get install libmpich12
=> no /usr/lib/libmpich.so.12 symlink
3- apt-get install libmpich-dev
=> still no /usr/lib/libmpich.so.12 symlink
4- ldconfig -v | grep changed
libmpich.so.12 -> libmpi.so (changed)
libmpichcxx.so.12 -> libmpicxx.so (changed)
libmpichfort.so.12 -> libmpif90.so (changed)
I have no idea how to solve this problem :/
Thanks,
_g.
- -- System Information:
Debian Release: stretch/sid
APT prefers testing
APT policy: (500, 'testing')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.7.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
-----BEGIN PGP SIGNATURE-----
iQEcBAEBCAAGBQJYGT3hAAoJEO/obGx//s+D5zQH/R9TUA/zyUMgmDugJr5sI36h
C4DMVbFuv4a6yOb9wR4x5w6JEpmOUrK9++bUWRcwUCQwRgZqjBx1mQL/7hzpHNcd
xb1rRl3et4WBxrPoHzZKqXlN6Hdg+NBGNG+bTpFN/D4vJV4wOJyoX94USp//UcnP
6pUO/GoRLR71aKbs21sf3VrENPPdyOBWLSGljPaQZsU8Uj3GozVX6HLSokz1rFU/
7PRY+I6tOpv53IhpbBLbn+1p/rSnpXYIgkZIHgnPiGxGU0qUjimH2SEwOpVO404g
tTIfosLClvRlNTo66JZH1KRjHdxBI7NYvvVIufKpnjh9PN7y8aBgqq3ER9n/hIQ=
=wGnc
-----END PGP SIGNATURE-----
--- End Message ---
--- Begin Message ---
Source: openmpi
Source-Version: 2.0.2~git.20161225-8
We believe that the bug you reported is fixed in the latest version of
openmpi, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 842...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <mckins...@debian.org> (supplier of updated openmpi package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 17 Dec 2016 14:17:24 +0000
Source: openmpi
Binary: openmpi-bin libopenmpi-dev libopenmpi2 openmpi-common openmpi-doc
Architecture: source amd64 all
Version: 2.0.2~git.20161225-8
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <mckins...@debian.org>
Changed-By: Alastair McKinstry <mckins...@debian.org>
Description:
libopenmpi-dev - high performance message passing library -- header files
libopenmpi2 - high performance message passing library -- shared library
openmpi-bin - high performance message passing library -- binaries
openmpi-common - high performance message passing library -- common files
openmpi-doc - high performance message passing library -- man pages
Closes: 833728 842881
Changes:
openmpi (2.0.2~git.20161225-8) unstable; urgency=medium
.
* Multiarch support. Closes: #833728, #842881.
Checksums-Sha1:
7768fc2600411e0610c4a8ffc978dfd9fda863b3 2796 openmpi_2.0.2~git.20161225-8.dsc
620ce9548c942d529ec223461ab995e60c80332d 60512
openmpi_2.0.2~git.20161225-8.debian.tar.xz
9c3b7c452c37c5849f2a16813ba93cb269a386c0 27262
libopenmpi-dev-dbgsym_2.0.2~git.20161225-8_amd64.deb
10840cba21aaf96e972a4a6f4a7aeaf49739bb4a 1059528
libopenmpi-dev_2.0.2~git.20161225-8_amd64.deb
9ec5e0a3a255ac77f19ff5b32c1162f9f64040d5 30523296
libopenmpi2-dbgsym_2.0.2~git.20161225-8_amd64.deb
6f4a6b20da0309c1e841ee231c8c5f1782afbd6e 2312736
libopenmpi2_2.0.2~git.20161225-8_amd64.deb
e4f688167e741a6b017308c6e3896cd250a3c48c 209586
openmpi-bin-dbgsym_2.0.2~git.20161225-8_amd64.deb
72a92b8c01dd5b5bd5fc06666d518465be09cdd0 168772
openmpi-bin_2.0.2~git.20161225-8_amd64.deb
d457391b4042f8af76f14a967a617f0ab37337ba 148264
openmpi-common_2.0.2~git.20161225-8_all.deb
93a0c3b907b8a8bc62f08143ba0d4ad17f21edd9 747774
openmpi-doc_2.0.2~git.20161225-8_all.deb
fc51c8c9eeecbae1bf63bbadf49e56fca41dcda9 11886
openmpi_2.0.2~git.20161225-8_amd64.buildinfo
Checksums-Sha256:
a33ef737f2c025c316a0dd59adf17ae82b5bbc360d144baec71a3988bb091113 2796
openmpi_2.0.2~git.20161225-8.dsc
239c176fbe7561507d9d073a9b76481ae95ead72f1729ba02bd6948ad83065fc 60512
openmpi_2.0.2~git.20161225-8.debian.tar.xz
0ecef52c4ceb98a9fc92edb88e8e22cc4ae8688bab210d97c76570f39408febe 27262
libopenmpi-dev-dbgsym_2.0.2~git.20161225-8_amd64.deb
1bff2d9faf6e81bef2d8bab89955d0f7f7bdffb2258cf1948c600ba2dfb72059 1059528
libopenmpi-dev_2.0.2~git.20161225-8_amd64.deb
19b49730c023bf367807f40f314635bc611eccab397643c44092e0ac77bca8af 30523296
libopenmpi2-dbgsym_2.0.2~git.20161225-8_amd64.deb
0a2cd4187f82540a1a95dc71ffa9211e5751c536abe8eedc19ed824a9a22781c 2312736
libopenmpi2_2.0.2~git.20161225-8_amd64.deb
23d41ebd38db06e9347c10367294e6cf8e53713aaeb58afc2714dfb94d674713 209586
openmpi-bin-dbgsym_2.0.2~git.20161225-8_amd64.deb
b7a472608ce32fbf8295ffd1b32eab924dc4b47efdd782aeaa2169ae3478503e 168772
openmpi-bin_2.0.2~git.20161225-8_amd64.deb
38e46c015356a2eef03118223a0080991ca99337e6389e980e0219e70b36214c 148264
openmpi-common_2.0.2~git.20161225-8_all.deb
13b201d3ea749e46f87e3aa7243b491f87b6cc379a4a64de7f776763e41549e6 747774
openmpi-doc_2.0.2~git.20161225-8_all.deb
c73d3b9d5101983d449cd381b515ef2f95947a38ca2382a4c35adf63d0505a73 11886
openmpi_2.0.2~git.20161225-8_amd64.buildinfo
Files:
0faca0498b49db14e8438503e04c430b 2796 net extra
openmpi_2.0.2~git.20161225-8.dsc
6110eb2fd09d1e19467520821484f26a 60512 net extra
openmpi_2.0.2~git.20161225-8.debian.tar.xz
dd1c7c45c43f8c1d35484b7d6047b2f4 27262 debug extra
libopenmpi-dev-dbgsym_2.0.2~git.20161225-8_amd64.deb
1a06dafa6ecce18fbcb40e8e4ec3efc2 1059528 libdevel extra
libopenmpi-dev_2.0.2~git.20161225-8_amd64.deb
cb0ab557771525b0a4bdb4fbe33d0c29 30523296 debug extra
libopenmpi2-dbgsym_2.0.2~git.20161225-8_amd64.deb
5ee3b009678ce3ae710df6082f1f1306 2312736 libs extra
libopenmpi2_2.0.2~git.20161225-8_amd64.deb
c491e451ebd52c6a92c007b630f432e4 209586 debug extra
openmpi-bin-dbgsym_2.0.2~git.20161225-8_amd64.deb
eb62a7524d42acfc1c98eaaf60783aac 168772 net extra
openmpi-bin_2.0.2~git.20161225-8_amd64.deb
3d4bfb3372b58f61d495744f719a4bfd 148264 net extra
openmpi-common_2.0.2~git.20161225-8_all.deb
2343683b13c0b4c51c1ece118b6ebaa6 747774 doc extra
openmpi-doc_2.0.2~git.20161225-8_all.deb
7fa9fef6efb380dfb26e21391dc2c310 11886 net extra
openmpi_2.0.2~git.20161225-8_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----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=coBF
-----END PGP SIGNATURE-----
--- End Message ---
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers