Your message dated Wed, 03 Jan 2018 11:02:18 +1100
with message-id <1514937738.2966.30.ca...@debian.org>
and subject line Re: Bug#858228: dolfin: PETSc and SCOTCH support disabled on
kfreebsd
has caused the Debian Bug report #858228,
regarding dolfin: PETSc and SCOTCH support disabled on kfreebsd
to be marked as done.
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858228: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=858228
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--- Begin Message ---
Source: dolfin
Version: 2016.2.0-3
Severity: normal
petsc and slepc are available on kfreebsd. But dolfin configuration
is unable to activate their support due to a linking error during
configuration tests. SCOTCH support also fails. A snippet from the
log gives:
-- Checking for package 'PETSc'
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29")
-- Checking for one of the modules 'craypetsc_real;PETSc'
-- Test PETSC_TEST_RUNS with shared library linking - Failed
-- Test PETSC_TEST_RUNS static linking - Failed
-- Check size of PetscInt
-- Check size of PetscInt - done
-- PETSc could not be found. Be sure to set PETSC_DIR. (missing:
PETSC_TEST_RUNS) (found suitable version "3.7.5", minimum required is "3.6")
-- Checking for package 'SCOTCH-PT'
-- Found SCOTCH (version 5.1.1.12)
-- Performing test SCOTCH_TEST_RUNS
-- Performing test SCOTCH_TEST_RUNS - Failed
-- Found ZLIB: /usr/lib/x86_64-kfreebsd-gnu/libz.so (found version "1.2.8")
-- Performing test SCOTCH_ZLIB_TEST_RUNS
-- Performing test SCOTCH_ZLIB_TEST_RUNS - Failed
-- SCOTCH could not be found. Be sure to set SCOTCH_DIR. (missing:
SCOTCH_TEST_RUNS)
I think the petsc error comes from <builddir>/CMakeFiles/petsc_test_lib.cpp
It does successfully link manually, for instance with
gcc `pkg-config --cflags --libs PETSc mpi` petsc_test_lib.cpp
mpi is needed here due to the use of ompi_mpi_comm_self in
libpetsc_real.so.
Does dolfin's cmake/modules/FindPETSc.cmake need any adjustments in
order to successfully configure PETSc support on kfreebsd?
(likewise FindSCOTCH.cmake ?)
-- System Information:
Debian Release: 9.0
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.9.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
On Mon, 20 Mar 2017 12:13:53 +0800 Drew Parsons <dpars...@debian.org>
wrote:
>
> petsc and slepc are available on kfreebsd. But dolfin configuration
> is unable to activate their support due to a linking error during
> configuration tests. SCOTCH support also fails.
Unfortunately Debian isn't able to continue support for kfreebsd, see
https://lists.debian.org/debian-bsd/2017/12/msg00008.html
This makes it impractical to test builds of dolfin on kfreebsd.
We'll have to consider kfreebsd unsupported now, so I'm closing this
bug.
Sorry, kfreebsd users.
Drew
--- End Message ---
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