Your message dated Mon, 26 Mar 2018 10:00:13 +0000
with message-id <e1f0ovf-00084w...@fasolo.debian.org>
and subject line Bug#880384: fixed in deal.ii 8.5.1-1
has caused the Debian Bug report #880384,
regarding deal.ii: FTBFS with boost >= 1.64, patch attached
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
880384: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=880384
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: deal.ii
Version: 8.4.2-2
Severity: important
Tags: patch
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu bionic ubuntu-patch
In Ubuntu, the attached patch was applied to achieve the following:
* boost_1.64.patch: Backport patch from upstream for boost >= 1.64.
Fairly self-explanatory. I backported the upstream commit with the boost
fix to facilitate the boost_1.65 transition. If you choose to package a
new upstream version, you might need to cherrypick the whole commit named
in the patch, as my backport is mangled to apply to 8.4.2.
... Adam
-- System Information:
Debian Release: buster/sid
APT prefers bionic
APT policy: (500, 'bionic')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.13.0-16-lowlatency (SMP w/4 CPU cores; PREEMPT)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8),
LANGUAGE=en_CA:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
diff -Nru deal.ii-8.4.2/debian/patches/boost_1.64.patch
deal.ii-8.4.2/debian/patches/boost_1.64.patch
--- deal.ii-8.4.2/debian/patches/boost_1.64.patch 1969-12-31
17:00:00.000000000 -0700
+++ deal.ii-8.4.2/debian/patches/boost_1.64.patch 2017-10-30
22:24:51.000000000 -0600
@@ -0,0 +1,79 @@
+From 9c874026deeb51c613e0418d37679fdf6b27c3e0 Mon Sep 17 00:00:00 2001
+From: Daniel Arndt <daniel.ar...@iwr.uni-heidelberg.de>
+Date: Tue, 25 Apr 2017 00:29:49 +0200
+Subject: [PATCH] Fix compilation with BOOST 1.64
+
+---
+ include/deal.II/base/aligned_vector.h | 10 +++++++++-
+ include/deal.II/lac/sparsity_pattern.h | 11 ++++++++++-
+ include/deal.II/lac/vector.h | 10 +++++++++-
+ 4 files changed, 37 insertions(+), 4 deletions(-)
+
+diff --git a/include/deal.II/base/aligned_vector.h
b/include/deal.II/base/aligned_vector.h
+index 9f3c431e43..c2253221e3 100644
+--- a/include/deal.II/base/aligned_vector.h
++++ b/include/deal.II/base/aligned_vector.h
+@@ -22,7 +22,15 @@
+ #include <deal.II/base/memory_consumption.h>
+ #include <deal.II/base/utilities.h>
+ #include <deal.II/base/parallel.h>
+-#include <boost/serialization/array.hpp>
++
++// boost::serialization::make_array used to be in array.hpp, but was
++// moved to a different file in BOOST 1.64
++#include <boost/version.hpp>
++#if BOOST_VERSION >= 106400
++# include <boost/serialization/array_wrapper.hpp>
++#else
++# include <boost/serialization/array.hpp>
++#endif
+ #include <boost/serialization/split_member.hpp>
+
+ #include <cstring>
+diff --git a/include/deal.II/lac/sparsity_pattern.h
b/include/deal.II/lac/sparsity_pattern.h
+index f8d9b29aeb..369a58c554 100644
+--- a/include/deal.II/lac/sparsity_pattern.h
++++ b/include/deal.II/lac/sparsity_pattern.h
+@@ -20,11 +20,20 @@
+ #include <deal.II/base/config.h>
+ #include <deal.II/base/exceptions.h>
+ #include <deal.II/base/subscriptor.h>
+-#include <boost/serialization/array.hpp>
++
++// boost::serialization::make_array used to be in array.hpp, but was
++// moved to a different file in BOOST 1.64
++#include <boost/version.hpp>
++#if BOOST_VERSION >= 106400
++# include <boost/serialization/array_wrapper.hpp>
++#else
++# include <boost/serialization/array.hpp>
++#endif
+ #include <boost/serialization/split_member.hpp>
+
+ #include <vector>
+ #include <iostream>
++#include <algorithm>
+
+ DEAL_II_NAMESPACE_OPEN
+
+diff --git a/include/deal.II/lac/vector.h b/include/deal.II/lac/vector.h
+index d5bf2b678c..7f6431c34e 100644
+--- a/include/deal.II/lac/vector.h
++++ b/include/deal.II/lac/vector.h
+@@ -23,7 +23,15 @@
+ #include <deal.II/base/exceptions.h>
+ #include <deal.II/base/subscriptor.h>
+ #include <deal.II/base/index_set.h>
+-#include <boost/serialization/array.hpp>
++
++// boost::serialization::make_array used to be in array.hpp, but was
++// moved to a different file in BOOST 1.64
++#include <boost/version.hpp>
++#if BOOST_VERSION >= 106400
++# include <boost/serialization/array_wrapper.hpp>
++#else
++# include <boost/serialization/array.hpp>
++#endif
+ #include <boost/serialization/split_member.hpp>
+
+ #include <cstdio>
diff -Nru deal.ii-8.4.2/debian/patches/series
deal.ii-8.4.2/debian/patches/series
--- deal.ii-8.4.2/debian/patches/series 2016-12-06 23:43:06.000000000 -0700
+++ deal.ii-8.4.2/debian/patches/series 2017-10-30 22:25:00.000000000 -0600
@@ -1,2 +1,3 @@
allow_different_slepc_petsc_versions.patch
work_around_a_doxygen_bug.patch
+boost_1.64.patch
--- End Message ---
--- Begin Message ---
Source: deal.ii
Source-Version: 8.5.1-1
We believe that the bug you reported is fixed in the latest version of
deal.ii, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 880...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Matthias Maier <tamiko+deb...@kyomu.43-1.org> (supplier of updated deal.ii
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 23 Mar 2018 08:24:39 +0000
Source: deal.ii
Binary: libdeal.ii-dev libdeal.ii-8.5.1 libdeal.ii-doc
Architecture: source amd64 all
Version: 8.5.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Matthias Maier <tamiko+deb...@kyomu.43-1.org>
Description:
libdeal.ii-8.5.1 - Finite Element Differential Equations Analysis Library
libdeal.ii-dev - Differential Equations Analysis Library - development files
libdeal.ii-doc - Differential Equations Analysis Library - html doc. and
examples
Closes: 880384
Changes:
deal.ii (8.5.1-1) unstable; urgency=medium
.
* Bump Standards-Version to 4.1.3
* drop obsolete doxygen patch
* This version contains upstream patches for compatibility with boost-1.64
and newer. (Closes: #880384)
* update debhelper compatibility level to 11
* fix lintian warnings
* update vcs/git links to salsa
* remove DEB_HOST_MULTIARCH definition
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