Hello.

"Bringing the system to run level 1 (single user) and then back to run
level 3 (multi user) should take care of the restart of most (if not
all) system services. But this is not an option if you are executing
the security upgrade from a remote connection (like ssh) since it will
be severed."
I'll upgrade from a remote connection (SSH). What should I do instead
of this procedure?

http://www.debian.org/doc/manuals/securing-debian-howto/ch4.en.html

Cheers


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