Your message dated Tue, 16 Oct 2018 15:00:10 +0000
with message-id <e1gcqpo-000eij...@fasolo.debian.org>
and subject line Bug#908069: fixed in cct 20170919+dfsg-1
has caused the Debian Bug report #908069,
regarding ITP: cct -- visually comparing bacterial, plasmid, chloroplast, or
mitochondrial sequences
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
908069: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=908069
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <ti...@debian.org>
* Package name : cct
Version : 20170919
Upstream Author : Paul Stothard <stoth...@ualberta.ca>,
* URL : http://stothard.afns.ualberta.ca/downloads/CCT/
* License : GPL-2+
Programming Lang: Perl, Python, sh
Description : visually comparing bacterial, plasmid, chloroplast, or
mitochondrial sequences
The CGView Comparison Tool (CCT) is a package for visually comparing
bacterial, plasmid, chloroplast, or mitochondrial sequences of interest
to existing genomes or sequence collections. The comparisons are
conducted using BLAST, and the BLAST results are presented in the form
of graphical maps that can also show sequence features, gene and protein
names, COG category assignments, and sequence composition
characteristics. CCT can generate maps in a variety of sizes, including
400 Megapixel maps suitable for posters. Comparisons can be conducted
within a particular species or genus, or all available genomes can be
used. The entire map creation process, from downloading sequences to
redrawing zoomed maps, can be completed easily using scripts included
with the CCT. User-defined features or analysis results can be included
on maps, and maps can be extensively customized. To simplify program
setup, a CCT virtual machine that includes all dependencies preinstalled
is available. Detailed tutorials illustrating the use of CCT are
included with the CCT documentation.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/cct
--- End Message ---
--- Begin Message ---
Source: cct
Source-Version: 20170919+dfsg-1
We believe that the bug you reported is fixed in the latest version of
cct, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 908...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated cct package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 05 Sep 2018 21:59:21 +0200
Source: cct
Binary: cct cct-examples
Architecture: source all
Version: 20170919+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
cct - visually comparing bacterial, plasmid, chloroplast, or mitochondr
cct-examples - example data for testing the package cct
Closes: 908069
Changes:
cct (20170919+dfsg-1) unstable; urgency=medium
.
* Initial release (Closes: #908069)
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cct-examples_20170919+dfsg-1_all.deb
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