Package: wnpp Severity: wishlist Subject: ITP: r-bioc-edaseq -- GNU R exploratory data analysis and normalization for RNA-Seq Package: wnpp Owner: Andreas Tille <ti...@debian.org> Severity: wishlist
* Package name : r-bioc-edaseq Version : 2.20.0 Upstream Author : Davide Risso, Sandrine Dudoit, Ludwig Geistlinger * URL : https://bioconductor.org/packages/EDASeq/ * License : Artistic-2.0 Programming Lang: GNU R Description : GNU R exploratory data analysis and normalization for RNA-Seq Numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010). Remark: This package is maintained by Debian R Packages Maintainers at https://salsa.debian.org/r-pkg-team/r-bioc-edaseq