Your message dated Fri, 15 May 2020 18:00:10 +0000
with message-id <e1jzed0-000h2g...@fasolo.debian.org>
and subject line Bug#960345: fixed in allelecount 4.1.0-1
has caused the Debian Bug report #960345,
regarding ITP: allelecount -- NGS copy number algorithms
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
960345: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=960345
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Subject: ITP: allelecount -- NGS copy number algorithms
Package: wnpp
Owner: Andreas Tille <ti...@debian.org>
Severity: wishlist
* Package name : allelecount
Version : 4.1.0
Upstream Author : Genome Research Ltd
* URL : https://github.com/cancerit/alleleCount
* License : AGPL-3
Programming Lang: C
Description : NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations
and a [cr|b]am file and generates a count of coverage of each allele
[ACGT] at that location (given any filter settings).
.
The alleleCount package primarily exists to prevent code duplication
between some other projects, specifically AscatNGS and Battenberg.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/allelecount
--- End Message ---
--- Begin Message ---
Source: allelecount
Source-Version: 4.1.0-1
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
allelecount, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 960...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated allelecount package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 12 May 2020 11:41:31 +0200
Source: allelecount
Binary: allelecount allelecount-dbgsym liballelecount-perl
Architecture: source amd64 all
Version: 4.1.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
allelecount - NGS copy number algorithms
liballelecount-perl - Perl interface to NGS copy number algorithms
Closes: 960345
Changes:
allelecount (4.1.0-1) unstable; urgency=medium
.
* Initial release (Closes: #960345)
Checksums-Sha1:
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3f567b4b0bb8863b0b554d8fc6d43590d0a3b102 14604
allelecount_4.1.0-1.debian.tar.xz
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allelecount-dbgsym_4.1.0-1_amd64.deb
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allelecount_4.1.0-1_amd64.buildinfo
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1bc811ea9542fcaa4b16e05b481b353ba2591f0b 20552
liballelecount-perl_4.1.0-1_all.deb
Checksums-Sha256:
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allelecount_4.1.0-1.dsc
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allelecount-dbgsym_4.1.0-1_amd64.deb
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allelecount_4.1.0-1_amd64.buildinfo
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allelecount_4.1.0-1_amd64.deb
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liballelecount-perl_4.1.0-1_all.deb
Files:
824b40429ef9eb3f96c7a2202c586a94 2402 science optional allelecount_4.1.0-1.dsc
70e2a60a54b090c88fd9596675a70751 1390047 science optional
allelecount_4.1.0.orig.tar.gz
5f904ab81a9d8b286f1b415e3ebae0d7 14604 science optional
allelecount_4.1.0-1.debian.tar.xz
9a1365aad0a6c2029b904b6fa39b3229 30532 debug optional
allelecount-dbgsym_4.1.0-1_amd64.deb
4574b3f063596a156b431eabac6eb429 7389 science optional
allelecount_4.1.0-1_amd64.buildinfo
907fcf08a83569d1bae5c6e8f4db48ae 28096 science optional
allelecount_4.1.0-1_amd64.deb
7c293203643108dd012c8b0624525d82 20552 perl optional
liballelecount-perl_4.1.0-1_all.deb
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--- End Message ---
