Your message dated Wed, 09 Feb 2022 17:00:11 +0000
with message-id <e1nhqkb-0006wz...@fasolo.debian.org>
and subject line Bug#962440: fixed in mdanalysis 2.0.0+dfsg1-1
has caused the Debian Bug report #962440,
regarding ITP: mdanalysis -- analyse molecular dynamics files and trajectories
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
962440: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962440
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Drew Parsons <dpars...@debian.org>
* Package name : mdanalysis
Version : 0.20.1
Upstream Author : O. Beckstein and team
* URL : https://www.mdanalysis.org/
* License : GPL
Programming Lang: Python
Description : analyse molecular dynamics files and trajectories
Enhances application of lammps, gromacs, and other molecular dynamics
simulation suites.
Complements or competes with pymatgen and mdtraj. We need them all
installable in order to be able to test which one is most useful for a
given project.
To be maintained under the Debichem Team.
--- End Message ---
--- Begin Message ---
Source: mdanalysis
Source-Version: 2.0.0+dfsg1-1
Done: Drew Parsons <dpars...@debian.org>
We believe that the bug you reported is fixed in the latest version of
mdanalysis, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 962...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <dpars...@debian.org> (supplier of updated mdanalysis package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 03 Sep 2021 03:12:37 +0200
Source: mdanalysis
Binary: python3-mdanalysis python3-mdanalysis-dbgsym
Architecture: source amd64
Version: 2.0.0+dfsg1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Drew Parsons <dpars...@debian.org>
Description:
python3-mdanalysis - analyse molecular dynamics files and trajectories
Closes: 962440
Changes:
mdanalysis (2.0.0+dfsg1-1) unstable; urgency=medium
.
* New upstream release.
- Build-Depends:
python3-h5py,
python3-numpy (>= 1.16.0~),
python3-netcdf4 (>= 1.0~),
python3-seaborn,
python3-sklearn,
python3-threadpoolctl
- applies debian patch fix_matplotlib_PR2763.patch
* Standards-Version: 4.6.0
* add detailed copyright entries (GPL-2 and GPL-3) to
debian/copyright, identified by :Copyright: tag in files.
CODE_OF_CONDUCT.md is CCA-3.0.
* debian/rules override_dh_clean: remove .c cython files
* run tests with MPLBACKEND=agg to avoid Xserver (Xvfb) errors
* Note that logo files are not used in source (+dfsg) since they are
non-free (not free to alter and redistribute alterations)
.
mdanalysis (1.0.0+dfsg1-2) unstable; urgency=medium
.
* Build-Depends: python3-all-dev (needs Python.h), cython3
python3-hypothesis, python3-sklearn (debian/tests also)
* python3-mdanalysis Depends: python3-duecredit,
Recommends: python3-sklearn
* use testsuite for build-time tests with pytest
(over all python versions)
.
mdanalysis (1.0.0+dfsg1-1) unstable; urgency=medium
.
* Initial release (Closes: #962440)
* debian/rules: pybuild source dir PYBUILD_DIR=package
* Build-Depends:
python3-numpy (>=1.13.3),
python3-biopython (>= 1.71),
python3-networkx (>= 1.0),
python3-griddataformats (>= 0.4.0),
python3-six (>= 1.4.0),
python3-mmtf (>= 1.0.0),
python3-joblib,
python3-scipy (>= 1.0.0),
python3-matplotlib (>= 1.5.1),
python3-mock,
python3-gsd (>= 1.4.0)
* Build-Depends: tox, python3-duecredit (to run build-time tests)
* debian patches:
- docs_use_built_module.patch stops doc build from using
raw (unbuilt) source to build docs. Set PYTHONPATH to .pybuild dir.
- fix_matplotlib_PR2763.patch applies upstream PR2763 to fix
matplotlib API.
* But docs are not built yet pending packaging of
python3-sphinx-sitemap (see RFP#970811).
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mdanalysis_2.0.0+dfsg1.orig.tar.xz
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mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
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mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
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python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
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python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb
Checksums-Sha256:
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mdanalysis_2.0.0+dfsg1-1.dsc
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mdanalysis_2.0.0+dfsg1.orig.tar.xz
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mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
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mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
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python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
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python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb
Files:
7253b370a8dcdf6327c22ae8114f4277 2617 python optional
mdanalysis_2.0.0+dfsg1-1.dsc
4b330c6d8380ec01e883dfb9bf2761f7 44055092 python optional
mdanalysis_2.0.0+dfsg1.orig.tar.xz
59f7de0b5eb0c9443add7d67503480d5 6644 python optional
mdanalysis_2.0.0+dfsg1-1.debian.tar.xz
0bf3db08f8f1018f2065f29eb81c5886 10653 python optional
mdanalysis_2.0.0+dfsg1-1_amd64.buildinfo
51d97e82d204a4418111fc7a0143ee9d 3566852 debug optional
python3-mdanalysis-dbgsym_2.0.0+dfsg1-1_amd64.deb
ed60b03487f2e1c1fca483363c496c03 1125200 python optional
python3-mdanalysis_2.0.0+dfsg1-1_amd64.deb
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--- End Message ---