Hi,

Is the 63 kB perfectly duplicated in your assembly ?


Le 2012-05-17 01:26, Mitchell Stanton-Cook a écrit :
> Hi Seb,
>
> Hope all is well.
>
> I was wondering if you have ever seen duplicate sequence in contigs.
>
> We have ~63 kB duplicate at the start of two different contigs. Beyond 
> this it's unique.
>
> This is Ray 1.7.
>
> I'm re-running with Ray2.0rc5.
>
> I came across these posts (ABySS specific):
>
> http://groups.google.com/group/abyss-users/browse_thread/thread/264e894b4ec0c96d/30dab75afa686878
> http://groups.google.com/group/abyss-users/browse_thread/thread/7a03ee033b11afc4
> http://groups.google.com/group/abyss-users/browse_thread/thread/f0f3a650bd12cf1e
>
>
> Any ideas?
>
> Regards
>
> Mitch
>


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