I have exactly the same problem:  In the exif file after using convert,
the Orientation lines say:

Orientation         |Project-Id-Version: libexif

I notice that there are two of these Orientation lines saying the same
thing (though separated by lines of other info). This is also true in my
source images - the camera seems to have duplicated the Orientation
information. It also seems to have duplicated the Resolution information
-- and this too seems to be corrupted. See the attached diff and the
original exif information.

** Attachment added: "exif.diff"
   http://launchpadlibrarian.net/16889656/exif.diff

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bad orientation tag causes gthumb to show strange value
https://bugs.launchpad.net/bugs/178575
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