I'm on 10.04. I'm right handed, but I use the left handed option some
times to give my right hand a break. Been using my right hand for a few
months now so decided to switch over today but there was no change with
system->preferences->mouse. xmodmap does work.

Output from xinput list is:

⎡ Virtual core pointer                          id=2    [master pointer  (3)]
⎜   ↳ Virtual core XTEST pointer                id=4    [slave  pointer  (2)]
⎜   ↳ USB Optical Mouse                         id=8    [slave  pointer  (2)]
⎜   ↳ Microsoft Natural® Ergonomic Keyboard 4000        id=10   [slave  pointer 
 (2)]
⎜   ↳ Macintosh mouse button emulation          id=11   [slave  pointer  (2)]
⎣ Virtual core keyboard                         id=3    [master keyboard (2)]
    ↳ Virtual core XTEST keyboard               id=5    [slave  keyboard (3)]
    ↳ Power Button                              id=6    [slave  keyboard (3)]
    ↳ Power Button                              id=7    [slave  keyboard (3)]
    ↳ Microsoft Natural® Ergonomic Keyboard 4000        id=9    [slave  
keyboard (3)]

-- 
Left handed mouse settings no longer working after system update
https://bugs.launchpad.net/bugs/426675
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