I have personally observed this bug on Fedora 16, Fedora 17 and openSUSE 12.1,
so it would appear to be an upstream Xorg bug, not a specific Ubuntu bug.

I can live very well with the circumvention described in Comment #23, but any-
one who has a strong desire for this bug to be fixed might like to open a bug
directly against Xorg itself, presumably on https://bugs.freedesktop.org/

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https://bugs.launchpad.net/bugs/680614

Title:
  Position of second monitor wrong in dual monitor setup if first
  monitor is 1366x768

Status in “xserver-xorg-video-ati” package in Ubuntu:
  Confirmed

Bug description:
  Binary package hint: xorg

  I'm using a two-monitor setup with an ati graphics card (Mobility Radeon HD 
4300) on my laptop(lenovo u450p).
  The Laptop screen has a hardware resolution of 1366x768, the external monitor 
a hardware resolution of 1920x1080. 

  If I set up the second monitor using

  xrandr --output HDMI-0 --off
  xrandr --output LVDS --auto
  xrandr --output HDMI-0 --auto --right-of LVDS

  (or the kde gui, the effects are equal)
  I expect

  1) the left 1366x768 area to be on the laptop screen, and 
  2) the right 1920x768 area to be on the big monitor. 

  But I observe:
  1) happens as expected
  2) happens almost. instead, the 2 rightmost pixels on the laptop monitor are 
repeated on the left border of the big monitor(filled with black to the 
bottom), in turn the two rightmost columns of the virtual display area are not 
visible on any monitor at all.

  If I switch the laptop monitor resolution to 1280x720, this effect does not 
occur, and - except for the then blurred laptop screen - everything works as 
expected.
  A screenshot shows the whole virtual desktop correctly.

  Ubuntu version: 10.10 (maverick)
  graphics card:
  01:00.0 VGA compatible controller: ATI Technologies Inc M92 LP [Mobility 
Radeon HD 4300 Series]
  xorg version: 1:7.5+6ubuntu3
  I'm using the 'radeon' display driver, as detected by default. fglrx is not 
installed.
  using kde 4.5.3

  ProblemType: Bug
  DistroRelease: Ubuntu 10.10
  Package: xorg 1:7.5+6ubuntu3
  ProcVersionSignature: Ubuntu 2.6.35-22.35-generic 2.6.35.4
  Uname: Linux 2.6.35-22-generic x86_64
  Architecture: amd64
  DRM.card0.HDMI_Type_A.1:
   status: connected
   enabled: enabled
   dpms: On
   modes: 1920x1080 1920x1080 1600x1200 1680x1050 1400x1050 1280x1024 1280x1024 
1440x900 1280x960 1152x864 1280x720 1024x768 1024x768 1024x768 832x624 800x600 
800x600 800x600 800x600 720x480 640x480 640x480 640x480 640x480 720x400
   edid-base64: 
AP///////wAEafokAQEBARAUAQOANB14Lu7VpVVImyYSUFS/74DRwLMAqUCVAJBAgYCBQHFPAjqAGHE4LUBYLEUACSUhAAAeAAAA/wBBNExNSVowNzIyMDcKAAAA/QAySx5TEwAKICAgICAgAAAA/ABBU1VTIFZIMjQyCiAgAW0CAyXxUpAFBAMCBwYPDh8UHh0TEhEWASMJfweDAQAAZQMMABAAAjqAGHE4LUBYLEUACSUhAAAeAR2AGHEcFiBYLCUACSUhAACeAR0AclHQHiBuKFUACSUhAAAeAjqA0HI4LUAQLEWACSUhAAAejArQiiDgLRAQPpYACSUhAAAYVw==
  DRM.card0.LVDS.1:
   status: connected
   enabled: enabled
   dpms: On
   modes: 1366x768 1366x768 1280x720 1152x768 1024x768 800x600 848x480 720x480 
640x480
   edid-base64: 
AP///////wAGrzwiAAAAAAATAQOAHxF4Cpf1m1lUjCUiUFQAAAABAQEBAQEBAQEBAQEBAQEBEhtWRlAAIzAmFjYANa0QAAAYDBJWRlAAIzAmFjYANa0QAAAYAAAA/gBBVU8KICAgICAgICAgAAAA/gBCMTQwWFcwMiBWMiAKAMk=
  DRM.card0.VGA.1:
   status: disconnected
   enabled: disabled
   dpms: Off
   modes: 
   edid-base64:
  Date: Tue Nov 23 20:11:52 2010
  InstallationMedia: Kubuntu 10.10 "Maverick Meerkat" - Release Candidate amd64 
(20100928.3)
  MachineType: LENOVO 3389
  ProcCmdLine: BOOT_IMAGE=/boot/vmlinuz-2.6.35-22-generic 
root=UUID=7965020f-a640-4958-8bea-09eb9aaa31a3 ro
  ProcEnviron:
   LANGUAGE=
   PATH=(custom, user)
   LANG=en_US.UTF-8
   SHELL=/bin/bash
  SourcePackage: xorg
  dmi.bios.date: 01/20/2010
  dmi.bios.vendor: LENOVO
  dmi.bios.version: 22CN35WW(V2.02)
  dmi.board.name: NITU1
  dmi.board.vendor: LENOVO
  dmi.board.version: REFERENCE
  dmi.chassis.asset.tag: No Asset Tag
  dmi.chassis.type: 10
  dmi.chassis.vendor: No Enclosure
  dmi.chassis.version: N/A
  dmi.modalias: 
dmi:bvnLENOVO:bvr22CN35WW(V2.02):bd01/20/2010:svnLENOVO:pn3389:pvrLenovoIdeaPadU450p:rvnLENOVO:rnNITU1:rvrREFERENCE:cvnNoEnclosure:ct10:cvrN/A:
  dmi.product.name: 3389
  dmi.product.version: Lenovo IdeaPad U450p
  dmi.sys.vendor: LENOVO
  peripherals:
   
  system:
   distro:             Ubuntu
   codename:           maverick
   architecture:       x86_64
   kernel:             2.6.35-22-generic
  --- 
  Architecture: amd64
  CompizPlugins: No value set for 
`/apps/compiz-1/general/screen0/options/active_plugins'
  CompositorRunning: kwin
  DRM.card0.HDMI.A.1:
   status: connected
   enabled: enabled
   dpms: On
   modes: 1920x1080 1600x1200 1680x1050 1400x1050 1280x1024 1280x1024 1440x900 
1280x960 1152x864 1024x768 1024x768 1024x768 832x624 800x600 800x600 800x600 
800x600 640x480 640x480 640x480 640x480 720x400
   edid-base64: 
AP///////wAEafokAQEBARAUAQOANB14Lu7VpVVImyYSUFS/74DRwLMAqUCVAJBAgYCBQHFPAjqAGHE4LUBYLEUACSUhAAAeAAAA/wBBNExNSVowNzIyMDcKAAAA/QAySx5TEwAKICAgICAgAAAA/ABBU1VTIFZIMjQyCiAgAW0CAyXxUpAFBAMCBwYPDh8UHh0TEhEWASMJfweDAQAAZQMMABAAAjqAGHE4LUBYLEUACSUhAAAeAR2AGHEcFiBYLCUACSUhAACeAR0AclHQHiBuKFUACSUhAAAeAjqA0HI4LUAQLEWACSUhAAAejArQiiDgLRAQPpYACSUhAAAYVw==
  DRM.card0.LVDS.1:
   status: connected
   enabled: enabled
   dpms: On
   modes: 1366x768 1366x768 1280x720 1152x768 1024x768 800x600 848x480 720x480 
640x480
   edid-base64: 
AP///////wAGrzwiAAAAAAATAQOAHxF4Cpf1m1lUjCUiUFQAAAABAQEBAQEBAQEBAQEBAQEBEhtWRlAAIzAmFjYANa0QAAAYDBJWRlAAIzAmFjYANa0QAAAYAAAA/gBBVU8KICAgICAgICAgAAAA/gBCMTQwWFcwMiBWMiAKAMk=
  DRM.card0.VGA.1:
   status: disconnected
   enabled: disabled
   dpms: Off
   modes: 
   edid-base64:
  DistUpgraded: Fresh install
  DistroCodename: natty
  DistroRelease: Ubuntu 11.04
  DistroVariant: kubuntu
  DkmsStatus: bcmwl, 5.100.82.38+bdcom, 2.6.38-8-generic, x86_64: installed
  GraphicsCard:
   ATI Technologies Inc M92 LP [Mobility Radeon HD 4300 Series] [1002:9552] 
(prog-if 00 [VGA controller])
     Subsystem: Lenovo Device [17aa:3903]
  InstallationMedia: Kubuntu 11.04 "Natty Narwhal" - Alpha amd64 (20110301.4)
  MachineType: LENOVO 3389
  NonfreeKernelModules: wl
  Package: xserver-xorg-video-ati 1:6.14.0-0ubuntu4
  PackageArchitecture: amd64
  ProcEnviron:
   LANGUAGE=en_DK
   PATH=(custom, user)
   LANG=en_DK.UTF-8
   LC_MESSAGES=en_DK.UTF-8
   SHELL=/bin/bash
  ProcKernelCmdLine: BOOT_IMAGE=/boot/vmlinuz-2.6.38-8-generic 
root=UUID=ab9c6c70-e9b1-4cad-bc9a-efc17e8e8a7d ro
  ProcVersionSignature: Ubuntu 2.6.38-8.42-generic 2.6.38.2
  Renderer: Unknown
  Tags:  natty kubuntu patch
  Uname: Linux 2.6.38-8-generic x86_64
  UpgradeStatus: No upgrade log present (probably fresh install)
  UserGroups: adm admin cdrom dialout lpadmin plugdev sambashare
  dmi.bios.date: 01/20/2010
  dmi.bios.vendor: LENOVO
  dmi.bios.version: 22CN35WW(V2.02)
  dmi.board.name: NITU1
  dmi.board.vendor: LENOVO
  dmi.board.version: REFERENCE
  dmi.chassis.asset.tag: No Asset Tag
  dmi.chassis.type: 10
  dmi.chassis.vendor: No Enclosure
  dmi.chassis.version: N/A
  dmi.modalias: 
dmi:bvnLENOVO:bvr22CN35WW(V2.02):bd01/20/2010:svnLENOVO:pn3389:pvrLenovoIdeaPadU450p:rvnLENOVO:rnNITU1:rvrREFERENCE:cvnNoEnclosure:ct10:cvrN/A:
  dmi.product.name: 3389
  dmi.product.version: Lenovo IdeaPad U450p
  dmi.sys.vendor: LENOVO
  version.compiz: compiz N/A
  version.ia32-libs: ia32-libs 20090808ubuntu13
  version.libdrm2: libdrm2 2.4.23-1ubuntu6
  version.libgl1-mesa-dri: libgl1-mesa-dri 7.10.2-0ubuntu2
  version.libgl1-mesa-dri-experimental: libgl1-mesa-dri-experimental N/A
  version.libgl1-mesa-glx: libgl1-mesa-glx 7.10.2-0ubuntu2
  version.xserver-xorg: xserver-xorg 1:7.6+4ubuntu3
  version.xserver-xorg-video-ati: xserver-xorg-video-ati 1:6.14.0-0ubuntu4
  version.xserver-xorg-video-intel: xserver-xorg-video-intel N/A
  version.xserver-xorg-video-nouveau: xserver-xorg-video-nouveau N/A

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