This might help clarify any desktop file ambiguity (in the case where
Eclipse is downloaded directly from the website and unpacked):

http://askubuntu.com/questions/26632/how-to-install-eclipse

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https://bugs.launchpad.net/bugs/1208019

Title:
  Eclipse menus doesn't show up in Saucy

Status in “eclipse” package in Ubuntu:
  Triaged
Status in “unity-gtk-module” package in Ubuntu:
  Triaged

Bug description:
  ****************
  HOW TO REPRODUCE
  ****************

  1. Run Eclipse.
  2. Move the cursor to the top of the screen.
  3. Click on any of the menu items (File, Edit, Navigate, ...)

  ******************
  EXPECTED BEHAVIOUR
  ******************

  - The content of the submenus show up.

  **************
  REAL BEHAVIOUR
  **************

  - Only the top-level headers are available.
  - Nothing happens when clicking on them
  - They don't show up in the HUD either.

  ***********
  WORK-AROUND
  ***********

  To modify "/usr/share/applications/eclipse.desktop" to look like this:

  [Desktop Entry]
  Type=Application
  Name=Eclipse
  Comment=Eclipse Integrated Development Environment
  Icon=eclipse
  Exec=env UBUNTU_MENUPROXY= eclipse
  Terminal=false
  Categories=Development;IDE;Java;

  ****************
  RELEVANT DETAILS
  ****************

  - Doesn't affect Ubuntu releases prior to 13.10.

  **************
  TECHNICAL INFO
  **************

  ProblemType: Bug
  DistroRelease: Ubuntu 13.10
  Package: eclipse 3.8.1-1ubuntu1
  ProcVersionSignature: Ubuntu 3.10.0-6.17-generic 3.10.3
  Uname: Linux 3.10.0-6-generic i686
  ApportVersion: 2.11-0ubuntu1
  Architecture: i386
  Date: Sat Aug  3 17:03:55 2013
  InstallationDate: Installed on 2013-07-08 (25 days ago)
  InstallationMedia: Ubuntu 13.10 "Saucy Salamander" - Alpha i386 (20130708)
  MarkForUpload: True
  PackageArchitecture: all
  SourcePackage: eclipse
  UpgradeStatus: No upgrade log present (probably fresh install)

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