(In reply to Yves Goergen from comment #42)
> In case you're not aware of it anymore, going offline and back online does 
> not resolve the issue. At least for me. 
> The only thing that does help is restarting Thunderbird, which I have to doo 
> every few days (snip)

Funny. It sounds that your Thunderbird is not standard one...
IIUC, IIRC, after Go Work Offline, Tb closes all connections, and after Go back 
Work Online, Tb executes login sooner or later, and after login, Tb opens 
Inbox(and others if requested) for new mail check by Biff, or open Inbox (or an 
Mbox) when selected, and upon first select Inbox/Mbox at a cached connection, 
Tb always issues "uid 1:* fetch Flags()" unless CONDSTORE is used. This is 
confirmed many times by getting IMAP log.
If  "uid 1:* fetch Flags()" is used, Tb should know all flags of all mails in 
an Mbox.
If not, it usually means that your Thunderbird is not properly configured.

Have you checked IMAP protocol level flow by yourself?
Do you correctly disable CONDSTORE support as stated in this bug more than one 
time?
Or if Inbox, did you do required "click Inbox while other than Inbox, for 
example account, is selected at Folder Pane"?
Because "new mail check by Biff" is not immediately invoked after going back to 
Work Online"(invoked at next new mail check interval), "time lag" exists 
between "going back to Work Online" and "first new mail check after going back 
to Work Online".

> Thunderbird is the closest, unfortunately.
It's sad. We will have to see complants by you, which surely won't help problem 
resolving,  many times in this bug....

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You received this bug notification because you are a member of Desktop
Packages, which is subscribed to thunderbird in Ubuntu.
https://bugs.launchpad.net/bugs/603402

Title:
  Thunderbird incorrectly shows some Gmail archived messages as unread
  via IMAP

Status in Mozilla Thunderbird Mail and News:
  Confirmed
Status in “thunderbird” package in Ubuntu:
  Triaged

Bug description:
  Binary package hint: thunderbird

  Steps to reproduce:
  1) Wait for a few messages to arrive in Inbox, thus being marked as unread.
  2) Mark all of them as read, then archive them.
  3) Click on All Mail folder.

  Actual Results:
  Only one of recently archived messages is marked as read (usually the newest 
one), the rest must be marked as read again.

  Expected Results:
  All of recently marked as read in Inbox and archived mails should be marked 
as read in All Mail folder, too.

  ProblemType: Bug
  DistroRelease: Ubuntu 10.04
  Package: thunderbird 3.0.5+build2+nobinonly-0ubuntu0.10.04.1
  ProcVersionSignature: Ubuntu 2.6.32-23.37-generic 2.6.32.15+drm33.5
  Uname: Linux 2.6.32-23-generic x86_64
  NonfreeKernelModules: wl
  Architecture: amd64
  Date: Fri Jul  9 02:22:30 2010
  InstallationMedia: Ubuntu 9.10 "Karmic Koala" - Release amd64 (20091027)
  SourcePackage: thunderbird

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