Mark, I'm having trouble trying to parse the unformatted text dump in
the email thread. Would you mind creating issues for the bugs you saw?
That way, you can put output in markdown blocks with triple backticks.
On Thu, Apr 6, 2023 at 3:27 PM Mark Owens <jmoapa...@gmail.com> wrote:
>
> After downloading the artifacts, I ran the following:
>
> tar szf accumulo-1.10.3-src.tar.gz
> cd accumulo-1.10.3/
> mvn clean package
>
> The output in the surefire-reports directory doesn't provide too much info.
>
> Test set:
> org.apache.accumulo.start.classloader.vfs.providers.VfsClassLoaderTest
> -------------------------------------------------------------------------------
> Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 1.716 s <<<
> FAILURE! - in
> org.apache.accumulo.start.classloader.vfs.providers.VfsClassLoaderTest
> org.apache.accumulo.start.classloader.vfs.providers.VfsClassLoaderTest
> Time elapsed: 1.698 s <<< ERROR!
> java.lang.ExceptionInInitializerError
> Caused by: java.lang.StringIndexOutOfBoundsException: begin 0, end 3,
> length 2
>
>
> [main} INFO org.apache.hadoop.hdfs.MiniDFSCluster - starting cluster:
> numNameNodes=1, numDataNodes=1
> [main} INFO org.apache.hadoop.hdfs.MiniDFSCluster - Shutting down the
> Mini HDFS Cluster
>
> No additional stacktrace info provided just from running the tests. I then
> attempted to install Accumulo using fluo-uno. ZooKeeper throws the
> following stacktrace (which I remember the out of bounds being related to
> in the past):
>
> > uno setup accumulo
> > uno status
> This display accumulo and haoop running but no ZK. Attempts to start again
> reveals the stacktrace info below.
> > uno start accumulo
>
> ZooKeeper JMX enabled by default
>
>
> Using config:
> ${HOME}/dev/fluo-uno/install/zookeeper-3.4.14/bin/../conf/zoo.cfg
>
> Starting zookeeper ... STARTED
>
>
> Exception in thread "main" java.lang.ExceptionInInitializerError
>
>
> at
> org.apache.hadoop.util.GenericOptionsParser.preProcessForWindows(GenericOptionsParser.java:438)
> at
> org.apache.hadoop.util.GenericOptionsParser.parseGeneralOptions(GenericOptionsParser.java:484)
>
> at
> org.apache.hadoop.util.GenericOptionsParser.<init>(GenericOptionsParser.java:170)
>
> at
> org.apache.hadoop.util.GenericOptionsParser.<init>(GenericOptionsParser.java:153)
>
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:64)
>
>
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
>
> at org.apache.hadoop.hdfs.tools.GetConf.main(GetConf.java:331)
>
>
> Caused by: java.lang.StringIndexOutOfBoundsException: begin 0, end 3,
> length 2
>
> at java.base/java.lang.String.checkBoundsBeginEnd(String.java:3319)
>
>
> at java.base/java.lang.String.substring(String.java:1874)
>
>
> at org.apache.hadoop.util.Shell.<clinit>(Shell.java:50)
>
>
> ... 7 more
>
>
> Starting namenodes on []
>
>
> localhost: starting namenode, logging to
> /home/mark/dev/fluo-uno/install/logs/hadoop/hadoop-mark-namenode-devlap.out
>
> localhost: starting datanode, logging to
> /home/mark/dev/fluo-uno/install/logs/hadoop/hadoop-mark-datanode-devlap.out
>
> Exception in thread "main" java.lang.ExceptionInInitializerError
>
>
> at
> org.apache.hadoop.util.GenericOptionsParser.preProcessForWindows(GenericOptionsParser.java:438)
> at
> org.apache.hadoop.util.GenericOptionsParser.parseGeneralOptions(GenericOptionsParser.java:484)
> at
> org.apache.hadoop.util.GenericOptionsParser.<init>(GenericOptionsParser.java:170)
> at
> org.apache.hadoop.util.GenericOptionsParser.<init>(GenericOptionsParser.java:153)
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:64)
>
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
>
> at org.apache.hadoop.hdfs.tools.GetConf.main(GetConf.java:331)
>
> Caused by: java.lang.StringIndexOutOfBoundsException: begin 0, end 3,
> length 2
>
> at java.base/java.lang.String.checkBoundsBeginEnd(String.java:3319)
>
>
> at java.base/java.lang.String.substring(String.java:1874)
>
>
> at org.apache.hadoop.util.Shell.<clinit>(Shell.java:50)
>
>
> ... 7 more
>
>
> starting yarn daemons
>
>
> starting resourcemanager, logging to
> /home/mark/dev/fluo-uno/install/logs/hadoop/yarn-mark-resourcemanager-devlap.out
>
> localhost: starting nodemanager, logging to
> /home/mark/dev/fluo-uno/install/logs/hadoop/yarn-mark-nodemanager-devlap.out
>
> Starting monitor on localhost
>
>
> Starting tablet servers .... done
>
>
> OpenJDK 64-Bit Server VM warning: Option UseConcMarkSweepGC was deprecated
> in version 9.0 and will likely be removed in a future release.
>
> Starting tserver on localhost
>
>
> WARNING: An illegal reflective access operation has occurred
>
>
> WARNING: Illegal reflective access by
> org.apache.hadoop.security.authentication.util.KerberosUtil
> (file:/home/mark/dev/fluo-uno/install/hadoop-2.6.5/share/hadoop/common
> /lib/hadoop-auth-2.6.5.jar) to method
> sun.security.krb5.Config.getInstance()
>
> WARNING: Please consider reporting this to the maintainers of
> org.apache.hadoop.security.authentication.util.KerberosUtil
>
> WARNING: Use --illegal-access=warn to enable warnings of further illegal
> reflective access operations
>
> WARNING: All illegal access operations will be denied in a future release
>
>
> 2023-04-06 15:21:02,511 [start.Main] ERROR: Thread
> 'org.apache.accumulo.master.state.SetGoalState' died.
> java.lang.ExceptionInInitializerError
>
> at org.apache.hadoop.util.StringUtils.<clinit>(StringUtils.java:79)
>
> at
> org.apache.hadoop.security.Groups.parseStaticMapping(Groups.java:116)
> at org.apache.hadoop.security.Groups.<init>(Groups.java:93)
> at org.apache.hadoop.security.Groups.<init>(Groups.java:73)
> at
> org.apache.hadoop.security.Groups.getUserToGroupsMappingService(Groups.java:293)
> at
> org.apache.hadoop.security.UserGroupInformation.initialize(UserGroupInformation.java:283)
> at
> org.apache.hadoop.security.UserGroupInformation.ensureInitialized(UserGroupInformation.java:260)
> at
> org.apache.hadoop.security.UserGroupInformation.loginUserFromSubject(UserGroupInformation.java:789)
> at
> org.apache.hadoop.security.UserGroupInformation.getLoginUser(UserGroupInformation.java:774)
> at
> org.apache.hadoop.security.UserGroupInformation.getCurrentUser(UserGroupInformation.java:647)
> at
> org.apache.hadoop.fs.FileSystem$Cache$Key.<init>(FileSystem.java:2755)
> at
> org.apache.hadoop.fs.FileSystem$Cache$Key.<init>(FileSystem.java:2747)
> at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:2613)
> at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:370)
> at org.apache.hadoop.fs.Path.getFileSystem(Path.java:296)
> at
> org.apache.accumulo.core.volume.VolumeImpl.<init>(VolumeImpl.java:45)
> at
> org.apache.accumulo.core.volume.VolumeConfiguration.create(VolumeConfiguration.java:161)
> at
> org.apache.accumulo.server.fs.VolumeManagerImpl.get(VolumeManagerImpl.java:357)
> at
> org.apache.accumulo.server.fs.VolumeManagerImpl.get(VolumeManagerImpl.java:339)
> at
> org.apache.accumulo.server.fs.VolumeManagerImpl.get(VolumeManagerImpl.java:333)
> at
> org.apache.accumulo.master.state.SetGoalState.main(SetGoalState.java:46)
> at
> java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native
> Method)
> at
> java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at
> java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.base/java.lang.reflect.Method.invoke(Method.java:566)
> at org.apache.accumulo.start.Main$2.run(Main.java:170)
> at java.base/java.lang.Thread.run(Thread.java:834)
> Caused by: java.lang.StringIndexOutOfBoundsException: begin 0, end 3,
> length 2
> at java.base/java.lang.String.checkBoundsBeginEnd(String.java:3319)
> at java.base/java.lang.String.substring(String.java:1874)
> at org.apache.hadoop.util.Shell.<clinit>(Shell.java:50)
> ... 27 more
>
>
>
> On Thu, Apr 6, 2023 at 3:09 PM Christopher <ctubb...@apache.org> wrote:
>
> > I think we need more of that stack trace to be able to interpret it at all.
> >
> > On Thu, Apr 6, 2023, 13:57 Mark Owens <jmoapa...@gmail.com> wrote:
> >
> > > I'm also running into an issue with the VfsClassLoaderTest.
> > >
> > > java.lang.ExceptionInInitializerError
> > >
> > >
> > > Caused by: java.lang.StringIndexOutOfBoundsException: begin 0, end 3,
> > > length 2
> > >
> > > I've seen this error message before but can't recall the details. May be
> > > some misconfiguration on my machine perhaps, but I'm not sure.
> > >
> > > On Thu, Apr 6, 2023 at 1:48 PM Dave Marion <dmario...@gmail.com> wrote:
> > >
> > > > `mvn -Dtimeout.factor=2 clean package -Psunny` works, but `mvn
> > > > -Dtimeout.factor=2 clean package -Psunny,hadoop3` fails with:
> > > >
> > > > [ERROR] Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed:
> > > > 1.153 s <<< FAILURE! - in
> > > > org.apache.accumulo.start.classloader.vfs.providers.VfsClassLoaderTest
> > > > [ERROR]
> > > > org.apache.accumulo.start.classloader.vfs.providers.VfsClassLoaderTest
> > > > Time elapsed: 1.15 s <<< ERROR!
> > > > java.lang.NoSuchMethodError: 'boolean
> > > >
> > > >
> > >
> > org.eclipse.jetty.servlet.ServletMapping.containsPathSpec(java.lang.String)'
> > > >
> > > > On Thu, Apr 6, 2023 at 1:36 PM Dave Marion <dmario...@gmail.com>
> > wrote:
> > > >
> > > > > `mvn -Dtimeout.factor=2 clean package` worked. Thanks!
> > > > >
> > > > > On Thu, Apr 6, 2023 at 1:19 PM Christopher <ctubb...@apache.org>
> > > wrote:
> > > > >
> > > > >> Might just be a coincidence. If it's still failing with a higher
> > > > timeout,
> > > > >> I
> > > > >> can look into it.
> > > > >>
> > > > >> On Thu, Apr 6, 2023, 12:51 Dave Marion <dmario...@gmail.com> wrote:
> > > > >>
> > > > >> > I just thought it was odd that it was working in one place (git
> > > > >> workspace),
> > > > >> > but not from the source tarball.
> > > > >> >
> > > > >> > On Thu, Apr 6, 2023 at 12:48 PM Christopher <ctubb...@apache.org>
> > > > >> wrote:
> > > > >> >
> > > > >> > > Those are timeouts. The tests are passing in Jenkins. I suspect
> > > your
> > > > >> > > machine is a little slower, but would finish with more time. You
> > > can
> > > > >> set
> > > > >> > > -Dtimeout.factor=2 to try to work around it for a local build
> > on a
> > > > >> > machine
> > > > >> > > with more constrained resources. I wouldn't be surprised if 1.10
> > > > tests
> > > > >> > were
> > > > >> > > a bit more flaky than newer branches, also, just because of test
> > > > >> > > improvements over time, but timeouts can happen for any of our
> > > > >> branches.
> > > > >> > So
> > > > >> > > overriding the arbitrary timeout by some factor can help.
> > > > >> > >
> > > > >> > > On Thu, Apr 6, 2023, 12:41 Dave Marion <dmario...@gmail.com>
> > > wrote:
> > > > >> > >
> > > > >> > > > Verified sha1 & md5 signatures
> > > > >> > > > Verified signing key
> > > > >> > > >
> > > > >> > > > Ran into an issue trying to build from the source tarball. I
> > > > tried 3
> > > > >> > > times
> > > > >> > > > with the command `mvn clean package` and the build failed in
> > the
> > > > >> same
> > > > >> > > spot
> > > > >> > > > every time (see below). Note that on the same machine I ran
> > `mvn
> > > > >> clean
> > > > >> > > > package` on my local git workspace copy of the 1.10 branch (at
> > > > >> > > > commit fb09e7e2594c451317ce6294b9dd27bd0c5e6c05) with no
> > issues.
> > > > >> > > >
> > > > >> > > > [ERROR] Tests run: 6, Failures: 0, Errors: 2, Skipped: 0, Time
> > > > >> elapsed:
> > > > >> > > > 96.173 s <<< FAILURE! - in
> > > > >> > > > org.apache.accumulo.minicluster.MiniAccumuloClusterTest
> > > > >> > > > [ERROR]
> > > > >> > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > org.apache.accumulo.minicluster.MiniAccumuloClusterTest.testPerTableClasspath
> > > > >> > > > Time elapsed: 60.009 s <<< ERROR!
> > > > >> > > > org.junit.runners.model.TestTimedOutException: test timed out
> > > > after
> > > > >> > 60000
> > > > >> > > > milliseconds
> > > > >> > > > at
> > > > >> > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > app//org.apache.accumulo.minicluster.MiniAccumuloClusterTest.testPerTableClasspath(MiniAccumuloClusterTest.java:169)
> > > > >> > > >
> > > > >> > > > [ERROR]
> > > > org.apache.accumulo.minicluster.MiniAccumuloClusterTest.test
> > > > >> > > Time
> > > > >> > > > elapsed: 30.001 s <<< ERROR!
> > > > >> > > > org.junit.runners.model.TestTimedOutException: test timed out
> > > > after
> > > > >> > 30000
> > > > >> > > > milliseconds
> > > > >> > > > at
> > > > >> > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > app//org.apache.accumulo.minicluster.MiniAccumuloClusterTest.test(MiniAccumuloClusterTest.java:157)
> > > > >> > > >
> > > > >> > > > On Wed, Apr 5, 2023 at 7:24 PM dev1 <d...@etcoleman.com>
> > wrote:
> > > > >> > > >
> > > > >> > > > > I did some quick checks and all looks good.
> > > > >> > > > >
> > > > >> > > > > - verified sha512 signatures
> > > > >> > > > > - verified signing key
> > > > >> > > > > - sunny tests pass.
> > > > >> > > > >
> > > > >> > > > > Ed Coleman
> > > > >> > > > >
> > > > >> > > > > -----Original Message-----
> > > > >> > > > > From: Christopher <ctubb...@apache.org>
> > > > >> > > > > Sent: Wednesday, April 5, 2023 4:25 PM
> > > > >> > > > > To: accumulo-dev <dev@accumulo.apache.org>
> > > > >> > > > > Subject: [TEST][VOTE] Apache Accumulo 1.10.3-rc0
> > > > >> > > > >
> > > > >> > > > > Accumulo Developers,
> > > > >> > > > >
> > > > >> > > > > This is not an actual vote.
> > > > >> > > > > I have prepared the following release candidate as a test
> > > build
> > > > >> for
> > > > >> > > > > 1.10.3. If there are no immediate objections or issues, I
> > > intend
> > > > >> to
> > > > >> > > > create
> > > > >> > > > > an RC1 release candidate in the next day or so, to vote on.
> > > > >> > > > >
> > > > >> > > > > Git Commit:
> > > > >> > > > > ed75b4521094faa6f6e1037a444747390a120068
> > > > >> > > > > Branch:
> > > > >> > > > > 1.10.3-rc0
> > > > >> > > > >
> > > > >> > > > > If this vote passes, a gpg-signed tag will be created using:
> > > > >> > > > > git tag -f -s -m 'Apache Accumulo 1.10.3' rel/1.10.3 \
> > > > >> > > > > ed75b4521094faa6f6e1037a444747390a120068
> > > > >> > > > >
> > > > >> > > > > Staging repo:
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > https://repository.apache.org/content/repositories/orgapacheaccumulo-1099
> > > > >> > > > > Source (official release artifact):
> > > > >> > > > >
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > https://repository.apache.org/content/repositories/orgapacheaccumulo-1099/org/apache/accumulo/accumulo/1.10.3/accumulo-1.10.3-src.tar.gz
> > > > >> > > > > Binary:
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > https://repository.apache.org/content/repositories/orgapacheaccumulo-1099/org/apache/accumulo/accumulo/1.10.3/accumulo-1.10.3-bin.tar.gz
> > > > >> > > > >
> > > > >> > > > > Append ".asc" to download the cryptographic signature for a
> > > > given
> > > > >> > > > artifact.
> > > > >> > > > > (You can also append ".sha1" or ".md5" instead in order to
> > > > verify
> > > > >> the
> > > > >> > > > > checksums generated by Maven to verify the integrity of the
> > > > Nexus
> > > > >> > > > > repository staging area.)
> > > > >> > > > >
> > > > >> > > > > Signing keys are available at
> > > > >> > > https://www.apache.org/dist/accumulo/KEYS
> > > > >> > > > > (Expected fingerprint:
> > > 8CC4F8A2B29C2B040F2B835D6F0CDAE700B6899D)
> > > > >> > > > >
> > > > >> > > > > In addition to the tarballs and their signatures, the
> > > following
> > > > >> > > checksum
> > > > >> > > > > files will be added to the dist/release SVN area after
> > > release:
> > > > >> > > > > accumulo-1.10.3-src.tar.gz.sha512 will contain:
> > > > >> > > > > SHA512 (accumulo-1.10.3-src.tar.gz) =
> > > > >> > > > >
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > 5ec3baab85a0338b273fb5bd79bf2146c855077333f8a170c9e7093810f8591c458479bcebb5d57a4134a00f02b1c060db159e6ff086241aac6532d0e3e033f2
> > > > >> > > > > accumulo-1.10.3-bin.tar.gz.sha512 will contain:
> > > > >> > > > > SHA512 (accumulo-1.10.3-bin.tar.gz) =
> > > > >> > > > >
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > f8465b81c37067001b31ee109648760d51b78d91cff7ac93735af1735c2b6ee4f37e58cbd64253e257590fdc03fe784ef85782cc5b5039a8db170ca965c8628c
> > > > >> > > > >
> > > > >> > > > > Release notes (in progress) can be found at:
> > > > >> > > > > https://accumulo.staged.apache.org/release/accumulo-1.10.3
> > > > >> > > > >
> > > > >> > > > > Release testing instructions:
> > > > >> > > > > https://accumulo.apache.org/contributor/verifying-release
> > > > >> > > > >
> > > > >> > > > > Please vote one of:
> > > > >> > > > > [ ] +1 - I have verified and accept...
> > > > >> > > > > [ ] +0 - I have reservations, but not strong enough to vote
> > > > >> > against...
> > > > >> > > > > [ ] -1 - Because..., I do not accept...
> > > > >> > > > > ... these artifacts as the 1.10.3 release of Apache
> > Accumulo.
> > > > >> > > > >
> > > > >> > > > > This vote will remain open until at least Sat Apr 8
> > 08:30:00
> > > PM
> > > > >> UTC
> > > > >> > > > 2023.
> > > > >> > > > > (Sat Apr 8 04:30:00 PM EDT 2023 / Sat Apr 8 01:30:00 PM
> > PDT
> > > > >> 2023)
> > > > >> > > > Voting
> > > > >> > > > > can continue after this deadline until the release manager
> > > sends
> > > > >> an
> > > > >> > > email
> > > > >> > > > > ending the vote.
> > > > >> > > > >
> > > > >> > > > > Thanks!
> > > > >> > > > >
> > > > >> > > > > P.S. Hint: download the whole staging repo with
> > > > >> > > > > wget -erobots=off -r -l inf -np -nH \
> > > > >> > > > >
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > >
> > >
> > https://repository.apache.org/content/repositories/orgapacheaccumulo-1099/
> > > > >> > > > > # note the trailing slash is needed
> > > > >> > > > >
> > > > >> > > >
> > > > >> > >
> > > > >> >
> > > > >>
> > > > >
> > > >
> > >
> >
