Hello,
I'm trying to do install.packages("arrow") in R 3.6.0 on CentOS 7 and it
errors out like this:
$ cat /etc/redhat-release
CentOS Linux release 7.9.2009 (Core)
$ R
R version 3.6.0 (2019-04-26) -- "Planting of a Tree"
> install.packages("arrow")
...
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
libgcc_s.so.1 must be installed for pthread_cancel to work
sh: line 1: 7367 Aborted (core dumped)
'/usr/lib64/R/bin/R' --no-save --slave 2>&1 <
'/tmp/RtmpLFPpbM/fileda264de3f6a'
Error: package or namespace load failed for 'arrow' in dyn.load(file,
DLLpath = DLLpath, ...):
unable to load shared object
'/usr/lib64/R/library/00LOCK-arrow/00new/arrow/libs/arrow.so':
/usr/lib64/R/library/00LOCK-arrow/00new/arrow/libs/arrow.so: undefined
symbol: _ZN6snappy11RawCompressEPKcmPcPm
Error: loading failed
Execution halted
ERROR: loading failed
* removing '/usr/lib64/R/library/arrow'
The downloaded source packages are in
'/tmp/RtmpBr83oT/downloaded_packages'
Updating HTML index of packages in '.Library'
Warning messages:
1: In install.packages("arrow") :
installation of package 'arrow' had non-zero exit status
2: In file.create(f.tg) :
cannot create file '/usr/share/doc/R-3.6.0/html/packages.html', reason
'No such file or directory'
3: In make.packages.html(.Library) : cannot update HTML package index
Is this expected? Is there a workaround?
Thank you!
Rares
